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Name : Spro_4673 (Spro_4673) Accession : YP_001480894.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 5163201 - 5165687 bp Length : 2487 bp Strand : + Note : PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: aha:AHA_0521 outer membrane usher protein DNA sequence : ATGACGTCATTACTGACACGGAAAAAAATACCCCTCACCGTCATTCTATCTTTCCTCTGGGTGCATTCGGCTTTTTCCGC CACGGAATTTAATACCGACGTATTAGATATTGGCGATCGCAGCAAAGTGGATTTATCGCGTTTTTCCGACGCCGATTACG TCATGCCCGGTGCCTATCTGCTGGATATCAAGATCAACCAGAAAACCCTGCCGCAGCGCAGCATCCAGTATTACCCGTCG CCGGACCAAAAGGATCGTTCCCGTGTCTGTCTGCCGCCGGATCTGATAGAGAAAATGGCGCTGAAAGAAGAAGTCGTCAA AAAAATCACCCTGTGGCACGACAACAGCTGCGCCGATATCAGCGGCATCAAAGGGGCGACCATTTCCGACCGCATCGGCG GGGGCGTGCTGGCGATCACTATTCCACAGGCCTGGATGAAATATTCCGATCCGGACTGGACGCCGCCGGAACAGTGGGAT GACGGCATCCCTGGTTTGTTGCTGGACTACAGCATCAGCGGCCAGGTCGGTAAGCAAAGCCACAATAACAACACCGCAGA AAACCTCAGCAGCTACGGGACGGTCGGCGCCAACCTGGGTGCCTGGCGTCTGCGCGCCGATTATCAGGCCACCTACAATC AGCAGGCCGGTCAGCGCGACAGCAATTTCGACTGGAACCAGATTTACGCCTATCGTGCACTGCCGATGCAGGCTGCCAAA CTGACGCTCGGCGAAATCTTCCTCGACTCGGGCGTGTTCGACTCCTACCGCTTCACCGGCCTTAACCTGGCCAGCGACGA GCGTATGCTGCCGCCAAACCTGCAGGGTTATGCACCGGAAGTGCGCGGCATTGCCAAAAGCAACGCCAAGATCACCGTGT CGCAAGAAGGCCGCACGCTGTACGAAACCACCGTGCCCGCCGGGCCGTTCGCCATTCAGGATCTCAACAGTTCGGTACGC GGTCGGCTGGATGTGAAGGTAGAAGAGCAGGACGGCAGCGTATCGACCTTCCAGGTAGACACCGCCACCATTCCTTACCT GACGCGCCCCGGCTATGTCCGCTACAACGTCGCCGTGGGCAAGCCCTCGGCTTACGATCACCGAACGCAAGGGCCGCTAT TCTCCGCCAGTGATTTCTCCTGGGGATTAACCAGCGCCTGGTCGCTGTACGGCGGCGCGTTGCTTGGCGGCGATTACAAC GCCTGGGCACTCGGCCTGGGTCGTGACCTGAACGTGTTTGGCGCCATGTCGGTGGACGTGACGCAGTCTATCGCCCGCTT GCCCAATGAGCCGACCGCCAGCGGCCTGTCGTTCAAGGTCAACTATGCCAAGCGGTTTGATGAGATGAACAGCCAGATCA CCTTTGCCGGCTACCGCTTCTCACAGCGCAAATTCATGAACATGTCGCAATATCTGCAGGAACGCTACAACGATTACGAC GAGCGCTACGACGGACGGCAAAAAGAGCTGTACACCATTACCGCCAGCAAAACCTTTATGGCGGAAGACAGCGCCAAGGC GATCACCGCTTACCTGACCTATTCGCACCAAACCTATTGGGATGCCAGGGCGCAGGATCGTTACGGGTTGTCTGCCAGTA AACTGTTCAACGTCGGCAATGTCAGCAACATCACCGCCTCGCTGTCGGCCTATCGCACCACTTATCACGGCCGCACCGAC GACAGTGTGATGGTGAATTTCAGCGTGCCGATTGGCGATCGCCGTCGGGTAGGCTACTCGTTGCAAACCAGCAACAGCGA CGTGACGCAGATGGCGTCCTACAACGACTACACCGATCCGAACAACACCTGGCAGGTCAGCGGTGGCTTTAACCAGTCAG GCAAATCACTGGCCCGTGGTTACTACAGCCATAACGCTTCGTTTGGTTCGCTCAACGCCAGCGCCTCTTATCAACAGGAC AGTTATTCGTCGATCGGCGGTACCTTCCGCAGTGGTATTACCGCCACCCGACACGGCATAGCCGCACACCAGAACTCCAG CAACGGCGGCAGCCGGATGATGCTCGATACCGACGGCATTGCCGGGGTGCCAATCAACAACGGCCGCGCCTACAGCAACC GTTTCGGCCTGGCGGTGATCTCCGACATCACCAGCTACTACAACACCGACACCCGCATCGACGTCAATACGTTGGCGGAC GACGTGGAGGCCACCCGCGCCGTAGTACAGGGCACGCTGACCGAAGGTGCCATCGGCTACCGCCACTTTGAGGTGGTGAA AGGCAGCAAGCTGCTGGCCACCATCAAACTGGCCGACGGCAGTGAACCGCCGTTTGGTGCCACGGTGCTGAGCGAAAAAG GCCGCGAAGTGGCCGTAGTGAACGACGGTGGCTCGGTCTACCTGACCGGCGTACAGCCGCAAGAGCAACTCGACGTCGCC TGGGAAGGCCAGCGTCAGTGCCGCATTGTCATACCGGGCGCCGCCAAGCCGCTGGATCAGCTCTTGCTGCCGTGCGCCAA ACTGTAA Protein sequence : MTSLLTRKKIPLTVILSFLWVHSAFSATEFNTDVLDIGDRSKVDLSRFSDADYVMPGAYLLDIKINQKTLPQRSIQYYPS PDQKDRSRVCLPPDLIEKMALKEEVVKKITLWHDNSCADISGIKGATISDRIGGGVLAITIPQAWMKYSDPDWTPPEQWD DGIPGLLLDYSISGQVGKQSHNNNTAENLSSYGTVGANLGAWRLRADYQATYNQQAGQRDSNFDWNQIYAYRALPMQAAK LTLGEIFLDSGVFDSYRFTGLNLASDERMLPPNLQGYAPEVRGIAKSNAKITVSQEGRTLYETTVPAGPFAIQDLNSSVR GRLDVKVEEQDGSVSTFQVDTATIPYLTRPGYVRYNVAVGKPSAYDHRTQGPLFSASDFSWGLTSAWSLYGGALLGGDYN AWALGLGRDLNVFGAMSVDVTQSIARLPNEPTASGLSFKVNYAKRFDEMNSQITFAGYRFSQRKFMNMSQYLQERYNDYD ERYDGRQKELYTITASKTFMAEDSAKAITAYLTYSHQTYWDARAQDRYGLSASKLFNVGNVSNITASLSAYRTTYHGRTD DSVMVNFSVPIGDRRRVGYSLQTSNSDVTQMASYNDYTDPNNTWQVSGGFNQSGKSLARGYYSHNASFGSLNASASYQQD SYSSIGGTFRSGITATRHGIAAHQNSSNGGSRMMLDTDGIAGVPINNGRAYSNRFGLAVISDITSYYNTDTRIDVNTLAD DVEATRAVVQGTLTEGAIGYRHFEVVKGSKLLATIKLADGSEPPFGATVLSEKGREVAVVNDGGSVYLTGVQPQEQLDVA WEGQRQCRIVIPGAAKPLDQLLLPCAKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 49 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 0.0 | 48 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 0.0 | 48 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 48 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 0.0 | 48 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 0.0 | 48 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spro_4673 | YP_001480894.1 | fimbrial biogenesis outer membrane usher protein | VFG1548 | Protein | 0.0 | 48 |
| Spro_4673 | YP_001480894.1 | fimbrial biogenesis outer membrane usher protein | VFG0884 | Protein | 0.0 | 48 |
| Spro_4673 | YP_001480894.1 | fimbrial biogenesis outer membrane usher protein | VFG0895 | Protein | 0.0 | 48 |
