|
Name : Spro_4627 (Spro_4627) Accession : YP_001480848.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 5103204 - 5105537 bp Length : 2334 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: yen:YE4000 putative transcription accessory protein DNA sequence : ATGAATGACCCACTGAGCCGCATTATTGCAACAGAACTGCAGGCCCGGCCGGAGCAAGTTGACTCCGCCATCCGTCTGCT GGATGAAGGTAATACCGTGCCCTTTATTGCACGCTATCGTAAGGAAGTCACCGGGGGTCTGGACGATACCCAACTGCGCC AGCTGGAAACCCGCCTGGGTTATCTGCGTGAACTGGAAGACCGCCGTCAGACCATCCTTAAATCAATCGACGAGCAGGGC AAACTGACCGAACAGCTGGCGGGGGCGATCACCGCCACGCAAAGCAAAACCGAACTTGAAGATCTCTACCTGCCGTACAA ACCCAAGCGCCGCACCCGTGGGCAGATCGCGATTGAAGCCGGTCTGGAGCCCCTGGCAGACACCCTGTGGCAGGATCCTC AGCAGCAGCCTGAACAACTGGCCGAAGGCTACGTTGATGCCGACAAGGGCGTAGCGGACGTTAAAGCCGCCCTCGACGGC GCGCGTTACATTCTGATGGAGCGCTTTGCCGAAGACGCCGCGCTGCTGGCCAAGGTTCGTAATTACCTGTGGAAGCACGC GCATCTGGTCTCCAAAGTGGTGGAAGGCAAAGAAGAAGCCGGCGCGAAATTCCGCGACTACTTCGATCACCACGAACCTA TTGCCCAGGTGCCTTCACACCGTGCGCTGGCCATGTTCCGTGGCCGCAACGAAGGCGTGCTGCAACTGGCGCTGAACGCC GACCCACAGTTTGAAGAAGCCCCGCGCGAAAGCCAGGCGGAACAGATCATCATCAGCCATCTCGATTTGCGCCTGAATAA CGCCCCGGCAGATGCCTGGCGCAAAGCGGTGGTCAACTGGACCTGGCGCATCAAGGTGTTGCTGCATCTGGAAACCGAAC TGATGAGCACCCTGCGCGAACGTGCGGAAGATGAAGCAATCAACGTCTTCGCCCGTAACATGCACGATTTGCTGATGGCC GCACCGGCCGGCATGCGTGCGACCATGGGGCTGGATCCGGGCTTGCGTACCGGGGTGAAAGTGGCGGTGGTGGATGCCAC CGGCAAGCTGGTCGCCACCGACACCGTCTACCCGCACACCGGCCAGGCCGCCAAAGCCGCGGCCATCGTCGCGGCACTGT GCATCAAACACAAAGTGGAACTGGTCGCCATCGGCAACGGTACCGCATCGCGTGAGACCGAGCGTTTTTATCTTGATTTG CAACAGCAATTCGGCGAAGTCAAAGCGCAGAAAGTGATCGTCAGCGAAGCCGGTGCCTCGGTGTATTCCGCCTCCGAACT GGCGGCGCTGGAGTTCCCGAATCTCGACGTCTCGCTGCGTGGCGCCGTCTCCATCGCCCGTCGCCTGCAGGATCCACTGG CCGAACTGGTCAAAATCGATCCGAAATCCATCGGTGTTGGTCAGTACCAGCACGATGTCAGCCAAAGCCAACTGGCGAAA AAACTCGATTCGGTGGTTGAAGACTGCGTAAACGCCGTCGGGGTTGATCTGAACACCGCTTCGGTGCCGCTGCTGACCCG CGTGGCCGGCCTGACCCGCATGATGGCGCAGAACATCGTTACCTGGCGTGATGAGAATGGCCGTTTCAGCAACCGCGAAC AGCTGTTGAAAGTCAGCCGCCTGGGGCCAAAAGCCTTTGAGCAGTGCGCTGGCTTCCTGCGTATCAACCACGGCGACAAC CCGCTGGACGCCTCGACCGTTCACCCGGAAACCTACCCGGTGGTCGAACGCATTCTGGCCGCCACCCGCCAGGCACTGCA AGATCTGATGGGTAACCCGGCAGCGGTACGCAGCCTGAAGGCCAGCGATTTCACCGACGACAAGTTCGGCGTGCCAACGG TGACCGACATCCTGAAAGAGCTGGAGAAACCGGGCCGCGATCCGCGTCCGGAATTCAAAACCGCCACCTTCGCCGAGGGC GTTGAAACCCTGAGCGACCTGCAGCCGGGGATGATTTTGGAAGGTTCAGTGACCAACGTCACCAACTTCGGAGCCTTTGT CGATATCGGCGTGCATCAGGACGGTCTGGTGCATATCTCCTCGTTGGCGGACAAGTTTGTCGAAGATCCGCACACCGTGG TGAAAGCCGGTGACATCGTCAAAGTGAAGGTGATGGAAGTGGATCTGCAGCGCAAACGCATCGCGCTGAGCATGCGTCTG GACGAGCAACCGGGTGAAGGTTCACCACGCCGCGGCGGTAACGCCGCCCCGGCCAGGGACAACGCCAACCGGGCACCGGT CAATAAGGGCAAACCGCGCGGCAACAACAACACCTCGGCGGGTAACAGCGCCATGGGTGACGCGCTGGCGGCGGCATTCG GCAAAAAATCTTAA Protein sequence : MNDPLSRIIATELQARPEQVDSAIRLLDEGNTVPFIARYRKEVTGGLDDTQLRQLETRLGYLRELEDRRQTILKSIDEQG KLTEQLAGAITATQSKTELEDLYLPYKPKRRTRGQIAIEAGLEPLADTLWQDPQQQPEQLAEGYVDADKGVADVKAALDG ARYILMERFAEDAALLAKVRNYLWKHAHLVSKVVEGKEEAGAKFRDYFDHHEPIAQVPSHRALAMFRGRNEGVLQLALNA DPQFEEAPRESQAEQIIISHLDLRLNNAPADAWRKAVVNWTWRIKVLLHLETELMSTLRERAEDEAINVFARNMHDLLMA APAGMRATMGLDPGLRTGVKVAVVDATGKLVATDTVYPHTGQAAKAAAIVAALCIKHKVELVAIGNGTASRETERFYLDL QQQFGEVKAQKVIVSEAGASVYSASELAALEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQSQLAK KLDSVVEDCVNAVGVDLNTASVPLLTRVAGLTRMMAQNIVTWRDENGRFSNREQLLKVSRLGPKAFEQCAGFLRINHGDN PLDASTVHPETYPVVERILAATRQALQDLMGNPAAVRSLKASDFTDDKFGVPTVTDILKELEKPGRDPRPEFKTATFAEG VETLSDLQPGMILEGSVTNVTNFGAFVDIGVHQDGLVHISSLADKFVEDPHTVVKAGDIVKVKVMEVDLQRKRIALSMRL DEQPGEGSPRRGGNAAPARDNANRAPVNKGKPRGNNNTSAGNSAMGDALAAAFGKKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 62 |
