Gene Information

Name : Spro_4393 (Spro_4393)
Accession : YP_001480615.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : putative DNA-binding transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 4857368 - 4858279 bp
Length : 912 bp
Strand : +
Note : PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: yen:YE3797 probable LysR-family transcriptional regulatory protein

DNA sequence :
ATGGAAAGACTAAAACGGATGTCGGTATTCGCCAAAGTGGTTGAATGCGGGTCATTTACTGCGGCAGCGCGCCAGTTGGA
TATGAGCGTTTCATCTATCAGCCAGACCGTCTCCAAACTGGAGAATGAGCTGCAGGTCAAGCTGCTCAACCGCAGCACGC
GCAGCATTGGCCTGACGGAGGCCGGAAAAATCTATTATCAGGGCTGTCGCCGCATGCTGCTGGAAGTCAGCGAAGTGCAT
GAGCAGCTGTACGCGTTTAACAATACGCCGACCGGCACGCTGCGCATTGGTAGCTCATCCACCATGGCACAAAACGTGCT
GGCAACCATGACCGCAGATATGCTCAAAGAGTACCCCGGCCTGACGGTGAACCTGGTGACCGGCATCCCGGCACCGGATC
TGATCGCCGACGGGCTGGACGTAGTGATCCGCACCGGCGCGCTGCAGGATTCCAGCCTGTTCTCCAAACGCCTGGGTTCA
ATGCCGATGGTAGTGTGCGCCGCCAAAAGCTATCTCAGCCAACACGGCACGCCGCTAAAACCAAGCGATATGGTCAATTT
TTCCTGGCTGGAATACAGCGTGCGGCCAGACAGCGAGTTCGAGCTGATCGCGCCAGAAGGCATCAGCACGCGCATCTCGC
CGCAGGGACGCTTCGTCACCAACGATTCACAGACCATGATCCGCTGGCTGAAAGCCGGGGCCGGTATCGCCTATGCACCG
CTGATGTGGGTGATCGAGGAGATCAAACGCGGAGAGATCGAGATCCTGTTCAAAAACTACCATTCGGATCCTCGCCCGGT
GTACGCAGTGTACACCGAGAAAGACAAGCTGCCGCTCAAGGTACAGGTGTGCATCAACTACCTGACCGAGTACTTTAAGC
GCGTGGGGGAAGTCTATCAGGGCTACCGCTGA

Protein sequence :
MERLKRMSVFAKVVECGSFTAAARQLDMSVSSISQTVSKLENELQVKLLNRSTRSIGLTEAGKIYYQGCRRMLLEVSEVH
EQLYAFNNTPTGTLRIGSSSTMAQNVLATMTADMLKEYPGLTVNLVTGIPAPDLIADGLDVVIRTGALQDSSLFSKRLGS
MPMVVCAAKSYLSQHGTPLKPSDMVNFSWLEYSVRPDSEFELIAPEGISTRISPQGRFVTNDSQTMIRWLKAGAGIAYAP
LMWVIEEIKRGEIEILFKNYHSDPRPVYAVYTEKDKLPLKVQVCINYLTEYFKRVGEVYQGYR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcaR1 CAI77370.1 putative lysR-family transcriptional regulator Not tested tc-PAIYe Protein 7e-135 91