Gene Information

Name : Spro_4182 (Spro_4182)
Accession : YP_001480404.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : lytic transglycosylase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4635686 - 4636378 bp
Length : 693 bp
Strand : -
Note : PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA0556 hypothetical protein

DNA sequence :
ATGGACACTCGCCGCGTTCTGACCCAGGGGCTATTTCACCTGTTTGCCTGCCTCACCTCTGTGGGCGCGGGAGCGGTTCA
TGCTGCCACCCAGCAGGTACCTTCCGGTTATCGGGAGGTAGCGTTGCGTCATGGGGTTCCTCCGGAGTCCCTGTATTCGG
TGGCGTTGGCCGAGACATCGATGGCGCCGAAAAGCATCGTCTCGGTAACCCGCGGCGCCGGTCTGGCCCCGGATGTGGAG
CGCCCCTGGCCCTGGACCATCAATGTTGCCGGCAAAGGGTATCGCTATGCCAGCCGACTGCAGGCCTGGGAAGCCTTACA
GCGTTTTTTGAAAACACATCCCAGAAAACGCATCGATGTTGGAATTGCCCAGGTCAATCTGGGCTGGAACGGCCATCACT
TTACGTCGACATGGGAGGCGTTTGAGCCGTACACCAACCTCAACGCGGCGGCGGCCATCCTGCGGGAGTGCTATGACCGT
AATCCTGGGAGTTGGCTGACAGCCGCCGGTTGCTATCACCACCCCGCTGGCGGCGCGCCTGCTGCCCGTTATAAATCCAT
TGTGAGCGGCAAGTTGGCACGCCTAAACAGCAGGACATCCGCCCCGACCCGGGTGGCGAATACAACCCTTACGCCCATGG
TGTTACCGGCACAAACGGCGGCACTGACTTGGATTGAACCACGGAGCCAATAA

Protein sequence :
MDTRRVLTQGLFHLFACLTSVGAGAVHAATQQVPSGYREVALRHGVPPESLYSVALAETSMAPKSIVSVTRGAGLAPDVE
RPWPWTINVAGKGYRYASRLQAWEALQRFLKTHPRKRIDVGIAQVNLGWNGHHFTSTWEAFEPYTNLNAAAAILRECYDR
NPGSWLTAAGCYHHPAGGAPAARYKSIVSGKLARLNSRTSAPTRVANTTLTPMVLPAQTAALTWIEPRSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 9e-41 54
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 9e-41 54
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 5e-47 54
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 4e-42 51
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 3e-45 49
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 5e-45 49
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 2e-25 44
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-25 44
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-25 43
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 8e-23 42
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 8e-25 41
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 2e-26 41