Gene Information

Name : Spro_4169 (Spro_4169)
Accession : YP_001480391.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : putative plasmid-like protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 4623062 - 4625926 bp
Length : 2865 bp
Strand : -
Note : KEGG: eca:ECA0573 putative plasmid-related protein

DNA sequence :
ATGCGATTTTCCCTGTTTGATAAAAAGCGCCAGACGCGCAAGACGCCGGTGGTGCCGGCTACGGGTGACCAGGACTCCGT
GATCGCCACTGAGGACGGCGTGTCGCTGTCCGTCGACGGGCGTGAGCCATTACGGCGCCCGGGTAAGATGACGGTAAAGG
ATGAGAAACAGGTGTATCACGCCAACCCGTCCATCGTTGATTACCTGCCCTGGGCGGAGTTTCTCGACCGCGAACAGTGT
ATTTTGCTCGATGACGGGGTGTCCGTCGGGGCTGTTTTTGACATCACGCCGGTAGCCACCGAAGGACGCACGGACGATCG
CCTGGAGCAAATGCGCGACACGGTGGAAGACGCCCTGCAGGACTCATTTGACGAGCATGACGAAAACCCCTGGGTGGTGC
AGTTCTTTTGCCAGGACGAGAACAACGTCGAGGCGTATATCGACCGCCTGAGAAATTACGTCAAACCCCATGCCCAGGGC
AGCGCGTTCACAGAAGACTGGCTGAAAGAAACCGAACGTCATATGCGCGGTATCGCTCGTCCGGAAGGCCTGTTTAAGGA
CACGCTGATCACCGATCAGCCATGGCGTGGGCAGCAACGTCGTACCCGTATGGTGGTGTATCGCTGGATTGGCAAGGGCA
ATCATGATCCGATGCCACCAGTTGCCATGCTGAATCAGACCTGTGAGCGGGTGACCGGGGCGCTCGCCGGCGCCGGCGTG
ATCTGCGTGCGCCAGAACGGGGCACAGGTCCATGACTGGCTGCTGCGTCATTTTAATCCGAACCCGGAATGGGTGGAAAA
AGAGACCCTGTACCGTGACGCCGCTTATTTTGACAGTCGTGACACGCCGGAAGGCGCCATGCCGGTGCAGAACGATTTTG
CCGAGACCCTGTTGTTCACCCCGCCCTTGTCCGATCCGGACCAGGGGGTATGGTGGTTCGATAACCAGGCGCATTGCGCC
ATTCCCGTCGAGAAGCTGCGCCGCCCGCCGGAGCCGGGCACCATCACCGGTGAAATGAAACGCGGGGAGAAGAAAATCAA
TGCGCTGATGGACTTGTTCCCGGAGGGAACGATGCTGTGCATGACCATCGTGGTACAGCCTCAGGACACGCTGGAGAATG
ATTTCAACAAGCTGTCGAAAAACGCCGTCGGCGAGAATACCGAGTCCGGCCGCGTGCGTCAGGATGTGGCGCAGGTGAAA
GAGTACCTGGGCAATCGCCACAAGCTGTACCGTGCCGGCATTACGTTTCTGCTGCGTGCCGGCGACCTGACCACACTCAA
CCATAAACGTGTCGATCTGACCAACGTGCTGCTGGGGGCCGGCCTGCAGCCGGTACGGCCGGAGTTTGATGTGGCGCCGC
TCAATACCTACCTGCGGGCGTTACCGATGTGTTTTAACCCGGAGACCGACAAGAAACACTGGTATACCCGCCTGACCTGG
GTGCAGCATCTGGCAGGGTTGTTGCCGGTGACCGGTCGTGAGACCGGAACCGGTAATCCCGGTATGAGCTTCTTCAATCG
TGGCGGGGATACGCTGACGGTTGACCCGCTTAACAAGCATGACCGCAGCCAAAATGCGCACATGCTGTATTTTGGCCCGA
CCGGCGCGGGGAAATCGGCGACGTTGTGTGCGACCTTATCGCAACTGATGGCGATACACCGGCCGCGGTTGTTTATCGCG
GAAGCGGGCAACTCGTTTGGGTTGCTGGCCGATTACTTCGAGAGTCAGGGGTTCAGCGTCAATAAGGTGAGCATCAAGCC
GGGCAGTGGTGTCTCGCTGCCGCCGTTCTCCTATGCGCACAAGCTGGTCGAAGATGCATTAACGACGTTGGCCCTGGATG
AAAATGACCTGCCGGATATCGATGCCGATGACGACGACGATGACGACAAGCGCGATTACCTGGGGGAAATGGAGATCTCG
GCGCGCATGATGATCACTGGCGGTGATGAGAAGGAAGAGCATGAGTTGAAGCGTGCCGACCGCGCGATGATCCGTGAAGC
CCTGTTGATGGCGGCGCGTCAGACCTATGACGAGGGGCGACAGATGTTGCCGGCAGACCTGCAGAAGGCGCTGTACACCC
TCTCGAAAGATGAAGGGAGTGATATCCGTAATGAGCAGCGTCGGGCCAAGGCGGCTGAAATGGCCGAGTCGCTCGGGATG
TTTACCCAGGCCGGCAGCTTCGAGGCGGAGTTGTTTAACCGCGAAGGTAGCCTGTGGCCAGAGGTGGATGTCACCCTGAT
TGACCTGGGACATCTGGCGCGTGAGGGGTATGAGGCGCAGATGGCGTTGACGATGGTGAGCCTGACCAACACCATCAACA
ACATTGCCGAACGAGACCAGTACTCGGAGCGGGACATCGTGTTCGCGGTGGATGAAGCGCACATTGTGACGGTGAATCCG
CTGCTGGCACCGTACATGACCAAAATCGTCAAGATGTGGCGTAAGCTCGGTGCCTGGCTGTGGCTGGCGACGCAGAACTT
AAAAGACTTCCCGGACATTGCCGAGAAGATGCTGAACATGGCGGAGTGGTGGGTCTGTCTGACGATGCCGCCGGAGGAGG
TCAATGACATTGCCCGCTTCAAAGCCCTGACCGAGGAGCAAAAAGCGGTGCTGCTGTCAGCCAGTAAGCTGTCCGGTTGC
TATACCGAAGGTGTGGTATTGTCGAAAAAACTCGAGGCGTTGTTTCGTGCGGTACCGCCGAGCCTGTACCTGGCGCTGGG
GATGACCGAGAAAGAAGAGAAGGCCGAGCGCCGCGCGCTGATGCAGGAGTTTGGTTGCAGCGAGCTTGAGGCTGCCCGTA
AGGTGGCGCAAAAGCTTGACCGCCTGCGCGGCCTGGTGGTGAACGGGGAGGATCGGGCTGCATGA

Protein sequence :
MRFSLFDKKRQTRKTPVVPATGDQDSVIATEDGVSLSVDGREPLRRPGKMTVKDEKQVYHANPSIVDYLPWAEFLDREQC
ILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQDSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQG
SAFTEDWLKETERHMRGIARPEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPVAMLNQTCERVTGALAGAGV
ICVRQNGAQVHDWLLRHFNPNPEWVEKETLYRDAAYFDSRDTPEGAMPVQNDFAETLLFTPPLSDPDQGVWWFDNQAHCA
IPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLCMTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVK
EYLGNRHKLYRAGITFLLRAGDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW
VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSATLCATLSQLMAIHRPRLFIA
EAGNSFGLLADYFESQGFSVNKVSIKPGSGVSLPPFSYAHKLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEIS
ARMMITGGDEKEEHELKRADRAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM
FTQAGSFEAELFNREGSLWPEVDVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQYSERDIVFAVDEAHIVTVNP
LLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNMAEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGC
YTEGVVLSKKLEALFRAVPPSLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLVVNGEDRAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2576 YP_002152295.1 hypothetical protein Not tested Not named Protein 0.0 70
STY4573 NP_458658.1 hypothetical protein Not tested SPI-7 Protein 0.0 67
YE3482 YP_001007641.1 hypothetical protein Not tested YAPI Protein 0.0 64
YpsIP31758_3705 YP_001402659.1 hypothetical protein Not tested YAPI Protein 0.0 64
api39 CAF28513.1 hypothetical protein Not tested YAPI Protein 0.0 64
ORF C47 AAN62141.1 hypothetical protein Not tested PAGI-2(C) Protein 0.0 51
unnamed ABR13362.1 hypothetical protein Not tested PAGI-5 Protein 0.0 50
RL022 AAP84149.1 conserved hypothetical protein Not tested PAPI-1 Protein 0.0 50
EXA33 ABD94642.1 conserved hypothetical protein Not tested ExoU island A Protein 0.0 50
virB4 CAI36125.1 VirB4 component Not tested PPHGI-1 Protein 0.0 50
ORF SG57 AAN62279.1 hypothetical protein Not tested PAGI-3(SG) Protein 0.0 49
Pmu_03070 YP_005176206.1 conjugative transfer ATPase TraC-like, PFL family Not tested ICEPmu1 Protein 0.0 49