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Name : Spro_4146 (Spro_4146) Accession : YP_001480368.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 4598672 - 4601212 bp Length : 2541 bp Strand : - Note : PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: plu:plu0416 hypothetical protein DNA sequence : ATGGCGTATTTATCTCCTGCGTCCAGGGTATTTCGTGCGCGCTTGCTGGGTATTTTCATTGTGGCTGCTTTAGGTGGAGA GGTTATATTCGCTCAGGCTGGGGAAGAGGTTCAGTTCAATACCGATATTTTAGATTTAAAAGATCGGGAAAATATCGATT TAAGCCAGTTTTCTCAGGGCGGGTTTATTATGCCCGGCACTTATCCGATGGTGGTGCGGATTAATGAGCAGGATTTACCG GAGCAGCCGGTCGTGTTTCGAGCGCCGGATAGTGATCCCAAAGGTAGTTTGGTGTGCTTGTCTCCCGAACTGGTTGGTCA ACTAGGGTTGAAGCCCGAAATGCTCGAAGGGCTGACCTGGTGGCACGATGGGCAGTGCCTTGATCTCAGCAGCTTGAAGG GGATGGAAGCGCGAGGCAATCTGAGCAATGGGGTGTTGTATTTGAGCATCCCACAGGCTTATTTGGAATATACCTCCGAT AACTGGGATCCCCCTTCGCGCTGGGATGATGGCATACCTGGTTTGTTGCTGGATTATAACATTAATGCGCAAACTCGGCG GCAACAGTCTCATGGCGATAAAGGCTATAGCCTGAGCGGTAACGGCACTATGGGGGCCAACCTCGGTGCCTGGCGCTTGC GTGCGGACTGGCAGACACGGCTTGAACATCAAACCGGCCAGGGGCAGAGCAACCAGCAAAACTGGGAGTGGAGCCGTTAT TACGCCTACCGCGCTATCCGCAGTCTGGGGGCGCGCTTAACGCTGGGTGAAGACTATCTCACCTCCGAAGTATTCGACAG CTTCCGCTTTAGCGGCCTGAGCCTGAACTCCGACGACAACATGTTACCGCCGAACCTGCGCGGCTACGCGCCGGAGGTCA CCGGGATCGCCCGCAGTAACGCAAAAGTGACTATAAGCCAGCAGGGGCGCGTGTTGTACGAGACTCAGGTGGCCTCGGGG CCTTTTCGGATCCAGGACATCAATAATGCGGTGAACGGCAAATTGGATGTTCGGGTAGAAGAGCAGGACGGCACAGTGCA GGAATTCCAAATGGATACCGCCAGCGTGCCTTACCTGACGCGCCCGGGGCGGGTGCGCTACAAGCTGGCGAGCGGTAAAC CTTCGGATTGGCAGCACCGAAGTGACGGCCCGTTGTTCGCTATGGGGGATTTCTCCTGGGGCATCAACAACGGCTGGTCA CTGTATGGCGGTGGGCTGGCAGCCGGTGATTACAACGCGGCATCGATTGGCTTTGGGCGTGATTTGCTGGTGTTCGGGGC GTTGGCGTTCGACGTTACCCAGTCTCGGGCAGTGCTGGATCGCTACGGCACGTTAAGCGGGCGTTCGTATCGACTCAGCT ATTCCAAAACGTTCGACGAATACGACAGCCAGGTGACGTTCGCCGGGTACCGATTCTCTGAGCGCAACTTTATGCGTATG GGGGAGTTTTTGGAGGCGCGGCGAGACAGTTCTTTGCTCAATCAAAGCAAAGAGATGTATACGGTCTCATTCAACAAGCA ATTCCGTGATCTGGGGCTGAGCGCATATGTGGATTACCAACACCAGACCTATTGGGACCGCCCGGCCAACGATCGGTTAA GCCTGTCGGTGTCGCGTTACTTTGATATTGGGGAATTCCGCAACCTTAGCCTGTCGCTCTCGGCCTATCGCAACACCTAC AACGGAGTGAGCGACGACGGTATGTATCTCTCACTGTCGATGCCATTCGGTAACAACGGCTCAGTGAGTTACAACACCAC GGTCAATCGTAATGATACCACGCACAGGGTGGGTTATTACGACCGGGTGGATGATCGCACCAACTATCAGCTCAATGCTG GTACCGCCCGCAGTGGTGAGTCGTTGAGTGGTTACATCAGCCATCGTGGCGATGTGGCGCAGGTGAATGCCAACGCCAGC TATCAGGCGGGGCAATATTCTTCGATGGGGCTTTCACTGCAAGGGGGCGCTACTGCGACGCTGGAAGGCGCTGCATTGCA TCGCTCCGGCATGACGGGGGGCACGCGGCTGTTAATTGATACCGATGGTGCGCCAAACGTGCCGGTGCGTGGTTATGGTC CAAGCGTGCGCTCTAATGCCTTCGGCAAAGTAGTGGTGGCAGATATCAGCAGTTACTACCGCAGCAAGGCGAGCATCGAT CTGGATAAGCTGGATGAGAATACGGAGGCCACCAACTCGGTAACGCAGGCCACATTGACTGAAGGTGCTATTGGCTACCG ACATTTTGAAGTGATCTCGGGAATGAAGGCAATGGCGGTTATCCGGTTGGCGGATGGCAGCACCCCGCCGTTTGGCGCCA CGGTGCGAAACAGCAAAGATCAGGATACCGGCATCGTCAACGAAGACGGCAGCGTTTATCTGAGCGGTATCAAGGCCGGG CAAATGATGTCGGTTAACTGGGATGGCCGCAGGCAATGTGAGATTTCTTTGCCGGAGACGCTGCCACAGAGTGACCAAAC GAATTTATTGCTGCCGTGTAGTGCGGTGGCGACTACAGAGAAAACAGGTAACGAATCATGA Protein sequence : MAYLSPASRVFRARLLGIFIVAALGGEVIFAQAGEEVQFNTDILDLKDRENIDLSQFSQGGFIMPGTYPMVVRINEQDLP EQPVVFRAPDSDPKGSLVCLSPELVGQLGLKPEMLEGLTWWHDGQCLDLSSLKGMEARGNLSNGVLYLSIPQAYLEYTSD NWDPPSRWDDGIPGLLLDYNINAQTRRQQSHGDKGYSLSGNGTMGANLGAWRLRADWQTRLEHQTGQGQSNQQNWEWSRY YAYRAIRSLGARLTLGEDYLTSEVFDSFRFSGLSLNSDDNMLPPNLRGYAPEVTGIARSNAKVTISQQGRVLYETQVASG PFRIQDINNAVNGKLDVRVEEQDGTVQEFQMDTASVPYLTRPGRVRYKLASGKPSDWQHRSDGPLFAMGDFSWGINNGWS LYGGGLAAGDYNAASIGFGRDLLVFGALAFDVTQSRAVLDRYGTLSGRSYRLSYSKTFDEYDSQVTFAGYRFSERNFMRM GEFLEARRDSSLLNQSKEMYTVSFNKQFRDLGLSAYVDYQHQTYWDRPANDRLSLSVSRYFDIGEFRNLSLSLSAYRNTY NGVSDDGMYLSLSMPFGNNGSVSYNTTVNRNDTTHRVGYYDRVDDRTNYQLNAGTARSGESLSGYISHRGDVAQVNANAS YQAGQYSSMGLSLQGGATATLEGAALHRSGMTGGTRLLIDTDGAPNVPVRGYGPSVRSNAFGKVVVADISSYYRSKASID LDKLDENTEATNSVTQATLTEGAIGYRHFEVISGMKAMAVIRLADGSTPPFGATVRNSKDQDTGIVNEDGSVYLSGIKAG QMMSVNWDGRRQCEISLPETLPQSDQTNLLLPCSAVATTEKTGNES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 50 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 3e-172 | 48 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 8e-171 | 48 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 1e-170 | 48 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 6e-172 | 48 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 5e-172 | 48 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 5e-172 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spro_4146 | YP_001480368.1 | fimbrial biogenesis outer membrane usher protein | VFG1548 | Protein | 2e-172 | 48 |
| Spro_4146 | YP_001480368.1 | fimbrial biogenesis outer membrane usher protein | VFG0884 | Protein | 3e-172 | 48 |
| Spro_4146 | YP_001480368.1 | fimbrial biogenesis outer membrane usher protein | VFG0895 | Protein | 2e-172 | 48 |
