Gene Information

Name : Spro_4117 (Spro_4117)
Accession : YP_001480340.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 4572097 - 4573110 bp
Length : 1014 bp
Strand : -
Note : PFAM: integrase family protein; KEGG: plu:plu1166 hypothetical protein

DNA sequence :
ATGCATAAATCTTGTGTTATGGATTGGGACACCTTGCTAGAAGAGTATTTTTTCTCCAAGGCGTTACGCCCGGAAACTGA
AAGGAGCTATCGCAGAGTGGTTGCTGTTTTTAGGAAATTTATCGGGTACGAGACATTACCGGATGAAGTCACGAACCGAG
AACTGATTTTGTGGCGTAGGGACATGTTGGGGAGAGGGTTAACAACCAGTACGTGGAACAACAAAGCTCGCCATTTACGT
GCGATTTACAACCAGGGGATAAAGAAAAAATGGCTCAACGTAGTGGAAAATCCGCTAAATGAAACGCAAGTGCCGCCGGG
TAGCAAGCGTAAAAAAATTCTGAACCGTGACCAGTTGGTTAAAGTGAATCTGGCGTTAGAACAATTTGAAGAACGCGAAA
AGTTAAGGGTAGGTAAATGTCGTCCTTGTGCGCTCTTTCCTGTGTGGTATTGGCGGACTGTCATAGACGTCTTGCGTTCG
ACTGGGATGCGGCAAAACCAGTTATTACATATACGACTAATGGATGTAGATCTGGAGGCAAACTCGATGTTGCTGTGTAA
AGAAGGCAGTAAAACGCATCGCGAGTGGTTAGTTCCTATCGTGAGCTTTATCCGTGAACGGATGCGAATACTTGTTGATC
GCGCGATAGCACAGGGGGCCGAACCGGCAGATTATCTGTTCGATGTAGCGCGATTCTTGAATCCATTGGGTGAGGTTGAC
TCAGAGCCTGCAATCCAACCTGTTCGCTCATTCTTCACCAGGCTGACGAAAGAGTGTGGCTTTAAGGTGAGCCCGCATCG
ATTCAGGCATACCCTGGCTACCGAAATGATGAAGTCACCCGATCGTAATTTGGCAATGGTTAAAGGTTTGCTTGGACATA
GGAGCGTCAGCACAACAATGGAATATGTCGAACTGGATTTAAAGGTTACCGGTCAAGCGTTAGAGAATGAGCTGTCGCTG
TATATGGATGTGATACCCGCGCGTGAAAGTGAGGCCAGACTCGTCTTGACATGA

Protein sequence :
MHKSCVMDWDTLLEEYFFSKALRPETERSYRRVVAVFRKFIGYETLPDEVTNRELILWRRDMLGRGLTTSTWNNKARHLR
AIYNQGIKKKWLNVVENPLNETQVPPGSKRKKILNRDQLVKVNLALEQFEEREKLRVGKCRPCALFPVWYWRTVIDVLRS
TGMRQNQLLHIRLMDVDLEANSMLLCKEGSKTHREWLVPIVSFIRERMRILVDRAIAQGAEPADYLFDVARFLNPLGEVD
SEPAIQPVRSFFTRLTKECGFKVSPHRFRHTLATEMMKSPDRNLAMVKGLLGHRSVSTTMEYVELDLKVTGQALENELSL
YMDVIPARESEARLVLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3686 YP_001402640.1 phage integrase Not tested YAPI Protein 2e-64 48
YE3450 YP_001007614.1 phage integrase Not tested YAPI Protein 2e-65 48
api95 CAF28569.1 putative phage integrase Not tested YAPI Protein 2e-64 48
STY4666 NP_458745.1 probable phage integrase Not tested SPI-7 Protein 4e-69 45
t4357 NP_807950.1 phage integrase Not tested SPI-7 Protein 4e-69 45
PMI2549 YP_002152268.1 phage integrase Not tested Not named Protein 5e-62 43