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Name : Spro_4107 (Spro_4107) Accession : YP_001480330.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 4561072 - 4563111 bp Length : 2040 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGCAACTCTACCTGTGCGAGAAACCCAGCCAGGGTAAAGATATCGGCGCTATTCTCGGGGCGACGCAGCGTAAGCAGGG TTACCTGGCGGGCGCCGGCGTCATTGTCACCTGGGCTATCGGTCACCTGCTGGAACAGGCCCAGCCGGAGACTTACGGTG AGCAGTTCGGCAGTCCCTGGCGTGAGTCCGTTCTTCCTATCGTCCCTACCCAGTGGAAAATGACGGTCAAAAAAGAGACT GCCGATCAGTTTGCTGTCATCCGCGGGTTGCTCAAACAGGTTGATTCTGTGGTGATTGCGACCGATGCAGACCGCGAGGG GGAGGTGATCGCGAGAGAGTTACTGGAGCATTGCCACTTTACCGGCCCGGTCCAGCGCCTCTGGTTGTCAGCGCTGGACG AGGCCAGTATTCGGCACGCCCTGGCGAACAAGCTCCCAGGCGAGAAGACTGCGCCCCTGTATGAAGCTGGCCTGGCGCGA TCACGGGCTGACTGGATGACGGGGATGAATTTAACCCGACTTTACACGCTCAAAGCCCGTGAGCAGGGATACGGCGAGGT GTTATCGATTGGGCGGGTGCAGACCCCTACGCTGGCGCTGGTCGTGAACCGTGACCGCGACATTGCCAACTTCATTTCCA AACCGTACTGGCAAGTCAGGGCCACGCTGCAGAAGGGCGGGATCGCCTTCCCGGCAAGCTGGGTTCCTGCCGCCAACTAC TGTGATGAGGAGAAGCGCTGTATTCAACAGAATGTGGCTCAAGCCGTTGTTCAGCTGTGTCAGCAAACAGGTCATGCCGT TGTGCTTGAGGTGGGGACCGAGCGCAAGAAGGAGTCCGCGCCGTTGGCCTTTGACCTGGGCACCCTGCAGCAGGCTTGCT CACGCAAGTGGGGGATGAGCGCCAACCAGGCCTTGAGTATCGCGCAGTCTCTGTATGAGACGCACAAAGCCACCACGTAT CCCCGGACGGATTGCGGCTATCTGCCGACATCGATGCGGGAAGAAGTTGCCGATGTGCTGAGCGCGGTTACCCGCACGGA CCCAACGCAGAGCGGCAGCGTTGCCAGGCTCGACAGGACATTTGTTTCTCGTATCTGGAATGACAAAAAAATCACGGCGC ACCACGGGATTATCCCAACCAAACAGCCGTTCGACCTGAGCAAGCTGTCTGCCGACGAGCTTAAGGTTTATCAGCTGATC CGTCAGCATTACCTGGCGCAGTTCCTGCCGTTACATGAAGTGGATGTGACGGAGGCTACTTTCAATATTGGCGGGCAACT GTTCCGCACCCGCGGAAAGGTCGAGGTGGTGGCCGGGTGGAAAGTGCTGTTCCAGCATGACGTGAGCGAGGCGAAGGAGG AATCTACCGACACAGATGATGTCCGGCTGCCAGCCCTGGTTAAAGGTGAAACCGTCGCGGTTGCCGGTGCTGAGCTCAAA ACGCTGCAAACGAAGCCCCCAGGGCATTTCACCGACGGGACATTGATCGCCGCGATGAAAAATGCAGCGGCATTCGTCAG TGATCCGCAACTGAAAAAGGTGTTGAAAGAGAACGCGGGGCTGGGGACGGAAGCGACGCGTGCCGGTATCCTGGAGACGC TGTTTAAACGTGGGTACCTGGAGAAGAAGGGCAAATACCTGCTCTCTACGCCGATCGCCGGCGAACTGATAGATGCGTTA CCGACCGCACTGACCAACCCCGGGATGACGGCGCTGTGGGAGCAGGCGTTGGACGAGATTGCTCAGGGTCAGATGACACT CGACACATTCATGAGCCGTCAGGCGCAGTGGACAGGGCACCTGGTGGAGAAAGGAAAGGCGCAAGCCGTGAAGTTTACCG CGCCACCTTCTCCACCTTGCCCGACCTGTAGCGGCACGATGCGCCGGCGTGCCGGCAAGAAAGGCAGTGGCGCCTTCTGG GGCTGCAGTAATTACCCCACTTGCCAGGGCATCATTAACATCGATGCTAAAGGTGGGCGCAAGGCTAAGCGCTATAAAGC AAAATCACCGGCTAAAAATAAAACAACCAAATCAGAGTAA Protein sequence : MQLYLCEKPSQGKDIGAILGATQRKQGYLAGAGVIVTWAIGHLLEQAQPETYGEQFGSPWRESVLPIVPTQWKMTVKKET ADQFAVIRGLLKQVDSVVIATDADREGEVIARELLEHCHFTGPVQRLWLSALDEASIRHALANKLPGEKTAPLYEAGLAR SRADWMTGMNLTRLYTLKAREQGYGEVLSIGRVQTPTLALVVNRDRDIANFISKPYWQVRATLQKGGIAFPASWVPAANY CDEEKRCIQQNVAQAVVQLCQQTGHAVVLEVGTERKKESAPLAFDLGTLQQACSRKWGMSANQALSIAQSLYETHKATTY PRTDCGYLPTSMREEVADVLSAVTRTDPTQSGSVARLDRTFVSRIWNDKKITAHHGIIPTKQPFDLSKLSADELKVYQLI RQHYLAQFLPLHEVDVTEATFNIGGQLFRTRGKVEVVAGWKVLFQHDVSEAKEESTDTDDVRLPALVKGETVAVAGAELK TLQTKPPGHFTDGTLIAAMKNAAAFVSDPQLKKVLKENAGLGTEATRAGILETLFKRGYLEKKGKYLLSTPIAGELIDAL PTALTNPGMTALWEQALDEIAQGQMTLDTFMSRQAQWTGHLVEKGKAQAVKFTAPPSPPCPTCSGTMRRRAGKKGSGAFW GCSNYPTCQGIINIDAKGGRKAKRYKAKSPAKNKTTKSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 0.0 | 66 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 66 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 0.0 | 66 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 0.0 | 59 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 3e-167 | 54 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 5e-170 | 53 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 1e-160 | 52 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 3e-157 | 51 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 1e-123 | 42 |
