Gene Information

Name : Spro_4105 (Spro_4105)
Accession : YP_001480328.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 4559273 - 4559818 bp
Length : 546 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: yen:YE3844 single-strand binding protein

DNA sequence : 
ATGGCGTCTCGCGGCGTAAACAAAGTCATACTTGTCGGTCATCTCGGCCAAGATCCGGAAGTCCGTTACATGCCAAATGG
CGGTGCTGTTGCTAACATTACCCTGGCGACCTCAGAGAGCTGGCGCGATAAGGCGACCGGTGAGCAGAAAGAAAAAACCG
AATGGCACCGTGTCGTGCTGTTTGGCAAGCTTGCCGAAATTGCCGGTGAATATTTGCGTAAGGGCTCGCAGGTTTACATT
GAAGGCTTCCTGCAGACACGCAAATGGACCGATCAGGCCGGTGTGGAAAAATACACCACTGAAATCGTTGTTAACATTGG
CGGCACTCTGCAGATGTTGGGGGGACGTTCACAACCAGCCAACGCTGGACAACCTGGGCAGGGCAGTTGGGGAAAACCAC
AACAACCTTCACACAGCGGTACGCCGGCCCAGCAACCCCAGCAAGCTCAATCGGGTGGGAATGCCGCGCCGATGGATTTT
GACGATGACATACCTTTCCTTGGGTTTGGTTACGGTATCGCAAAATCAGCCATTTGCGCTCTGTGA

Protein sequence : 
MASRGVNKVILVGHLGQDPEVRYMPNGGAVANITLATSESWRDKATGEQKEKTEWHRVVLFGKLAEIAGEYLRKGSQVYI
EGFLQTRKWTDQAGVEKYTTEIVVNIGGTLQMLGGRSQPANAGQPGQGSWGKPQQPSHSGTPAQQPQQAQSGGNAAPMDF
DDDIPFLGFGYGIAKSAICAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-51 66
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-51 66
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-51 66
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 4e-34 58
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 4e-32 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_4105 YP_001480328.1 single-strand binding protein VFG0576 Protein 6e-43 66