Gene Information

Name : Spro_4088 (Spro_4088)
Accession : YP_001480311.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4546684 - 4548180 bp
Length : 1497 bp
Strand : -
Note : KEGG: eca:ECA0570 hypothetical protein

DNA sequence :
ATGGCTGATGTGAAATCCAACATGTTGCCGAAGGTGATTGTAATCGGCGTGCTGGCCGCGTCCATTGTCGTCGGGCTCAA
AGCCTGTAAAGACGATAAAACGCCGGAGAAGCCCCAGCAGGCGCATAACGTCCTGGCCAACATGTCGCCGGAGGAGTTGC
GCGCCCTGGGCGTTGAAGGGGATACCCCGGAAGACACGCTGCGTACCCTGGTCGGCACCCTGCGCACCACCCGAACCCAG
CAGGCCGAGCTGCAGAGCAACATTGACAAGGTGTTGAAAGAAAACGAAGCACTGCGCAAACGCAATACTAATGTCTCCGG
CCAGGTCAACGAGGCCGTGGCCGGCTACCAGAAACAGGCGCAACAGCGTCAGCAGCAGCTTCAGCAGGAGCAGCAAACGC
TGATGGGGAAAATCCAGACGCTGACCGAACAATTGGCCGGAAACAAAGACAAGGCGAAGAGCGACAGCGATATCCCGCTC
GGTCTGGGGCTGGATGGCATGGGGGCCGGCGAGGGCAGTGCGGCGCCTGGCCAGGACGGGTTGATGTGGGTCGGTCCGAA
GGACATGAAAGAACCCGATCCGCGCAATCCGAACAGCGTCAAAGACGGCCCGCAGTTCCCAACATCGTTCCTCTCGGATA
ACGCCATCACGCGCCAGAAAGCCGCCTATGAGCAGCAGGTCAAAGGCCACACCAATGAAAAAGGGGCGGAGGAGAACGCC
GAGCCGGTGTTTACCCTGCCCGAGAATTCCACCCTGGTGGGCAGTCGGTCCATGACGGCGCTGCTGGGCCGCGTGCCGAT
CAACGGCACGGTGACCGATCCCTATCCCTTCAAGCTGATGATTGGCAAAGACAACCTGACAGCGAACGGCATTGAGCTGC
CGGACGTGGAAGGGGCGATTGTCTCGGGGACCGCCAGCGGGGACTGGACATTGTCGTGTGTGCGCGGCCAGGTCAACAGC
ATCACCTTCGTGTTTGCGGACGGTACGGTACGCACCTTGCCGCATCCTGACACCAATATGAAGGCAAACAGCAACAACAA
TAGCGGCAACAGTGGCAAAGACGTCAGCACCACCGCCGGTATCGGCTGGATCTCCGATGACAATGGCATTCCCTGTATCG
GTGGGGAGCGTAAATCCAATGCCTCGACCTACCTGCCGACCATTGCCGCGTTGTCTGCCGCCAGCGCCGCCGGTGAGGGG
ATCAGCCAGGGGCAATACACCACGCAAAACAATGTCAATGGCATCAGCGCCACCATGACCGGTAATGCCGGCCAGGCGGT
ACTGGGCAAAGCCCTGTCCGGCGGAATGAAAGAGACCGCCGATTGGGTACGCGAACGCTACGGCATGATGTTCGACGCCA
TCTACGTCCCTCCGGGCCAGAAACTGGCCGTACACATTACCCGCCAACTGGCGATCGATTTTGAGACCAAAGGGCGCAAG
GTGCGTTACGACTTCAACCTGCCAGGCGAAGACGGCAGCACCGGCGGACTGGATTAA

Protein sequence :
MADVKSNMLPKVIVIGVLAASIVVGLKACKDDKTPEKPQQAHNVLANMSPEELRALGVEGDTPEDTLRTLVGTLRTTRTQ
QAELQSNIDKVLKENEALRKRNTNVSGQVNEAVAGYQKQAQQRQQQLQQEQQTLMGKIQTLTEQLAGNKDKAKSDSDIPL
GLGLDGMGAGEGSAAPGQDGLMWVGPKDMKEPDPRNPNSVKDGPQFPTSFLSDNAITRQKAAYEQQVKGHTNEKGAEENA
EPVFTLPENSTLVGSRSMTALLGRVPINGTVTDPYPFKLMIGKDNLTANGIELPDVEGAIVSGTASGDWTLSCVRGQVNS
ITFVFADGTVRTLPHPDTNMKANSNNNSGNSGKDVSTTAGIGWISDDNGIPCIGGERKSNASTYLPTIAALSAASAAGEG
ISQGQYTTQNNVNGISATMTGNAGQAVLGKALSGGMKETADWVRERYGMMFDAIYVPPGQKLAVHITRQLAIDFETKGRK
VRYDFNLPGEDGSTGGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2579 YP_002152298.1 hypothetical protein Not tested Not named Protein 1e-113 53
t4268 NP_807865.1 hypothetical protein Not tested SPI-7 Protein 3e-105 51
YE3484 YP_001007643.1 hypothetical protein Not tested YAPI Protein 4e-96 50
STY4570 NP_458655.1 putative exported protein Not tested SPI-7 Protein 2e-104 50
api37 CAF28511.1 putative exported protein Not tested YAPI Protein 4e-98 49
YpsIP31758_3707 YP_001402661.1 hypothetical protein Not tested YAPI Protein 3e-97 49
EXA35 ABD94644.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-67 41
RL024 AAP84151.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-64 41