Gene Information

Name : Spro_4081 (Spro_4081)
Accession : YP_001480304.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : Integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 4534928 - 4535560 bp
Length : 633 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: ypp:YPDSF_4015 hypothetical protein

DNA sequence :
ATGTTAATCACAAGCGCGTGTACCGCCTTTAATCATCTGAGCGGGCTGGGCGTAAAACGCAGACGTCGTCGTAAAGGGCT
GGCAACAGAACGTCTGCCGCTGCTCCGCCCGGCGGCGCCCAATCTGACCTGGTCGATGGATTTCGTCATGGACGCATTGG
CCACCGGTCGCAGGATAAAGTGCCTTACCTGCGTGGATGACTTCACGAAGGAATGCCTGACGGTCACTGTTGCCTTTGGG
ATTTCAGGCGTGCAGGTCACGCGCATTCTGGACAGTATTGCGCTGTTTCGCGGCTATCCGGCTACGATAAGAACTGACCA
GGGGCCGGAGTTTACCTGCAGAGCACTTGACCAGTGGGCTTATGAGCATGGCGTGGAGCTGCGGCTTATTCAGCCCGGTA
AGCCGACACAGAACGGATTTATTGAGAGTTTTAACGGACGCTTTCGCGATGAATGCCTTAATGAACACTGGTTCAGCGAC
GTCAGTCATGCCAGGATAACCATCAGTCAATGGCGTCAGGATTATAACGAGTGCCGTCCGCACTCCACGCTGAATTATCA
GACGCCGTCTGAATTTGCGGCGGGTTGGAGAAAGGGTAATTCTGATCGTGAAGGATCCGACATTACTAACTGA

Protein sequence :
MLITSACTAFNHLSGLGVKRRRRRKGLATERLPLLRPAAPNLTWSMDFVMDALATGRRIKCLTCVDDFTKECLTVTVAFG
ISGVQVTRILDSIALFRGYPATIRTDQGPEFTCRALDQWAYEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSD
VSHARITISQWRQDYNECRPHSTLNYQTPSEFAAGWRKGNSDREGSDITN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46578.1 IS1222-like transposase Not tested HPI Protein 3e-72 96
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 4e-54 70
RS13 AAP82958.1 putative transposase Not tested PAPI-2 Protein 1e-43 63