Gene Information

Name : Spro_3990 (Spro_3990)
Accession : YP_001480213.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4425686 - 4426348 bp
Length : 663 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: eca:ECA0008 two-component system response regulator

DNA sequence : 
ATGCGAATTCTGCTGATAGAAGATGACAAGTTAATCGGCGACGGTATCAAGGCCGGGCTGACCAGGTTGGGTTTTAATCT
GGACTGGTTTACCGATGGACTGGTCGGCAAAAATGCGCTGGAAAGCGCGCCTTACGATGCGGTGATCCTCGACTTGAGCC
TGCCGGGCCTCGATGGCCTGGATCTGTTGCGTCAGTGGCGGCAGGCCGGCCATGACGTGCCGGTGCTGATCCTGACCGCG
CGTGACGCACTGGAGCAACGGGTTAGCGGCCTGCAAAGCGGTGCCGATGATTACCTGTGCAAACCTTTTGCCCTGACGGA
GGTAGCGGCGCGCCTGCAGGCCTTGATTCGCCGTCGTCACGGCCAACTGATGCCGCAACTGGTCCATGGCAATGTGGTGT
TCGATACCGCAACCCGCAGCGTGAGCTGTAACGGTGAGCCGGTCACGCTGACCCCGCGTGAATTGGCGGTGCTGGAGCTG
TTTTTGCATAACAAGGGGCGGGTATTGGCACGGCCGCTGATCCAGGAAAAACTGTACAACTGGGACGACGAAGTCAGCAG
CAACGCGGTGGAGGTGCATATCCATCATCTGCGGCGCAAGCTGGGTAACGGGTTTATCCGCACCATACACGGCGTGGGTT
ATACGCTGGGGGACAACGCGTGA

Protein sequence : 
MRILLIEDDKLIGDGIKAGLTRLGFNLDWFTDGLVGKNALESAPYDAVILDLSLPGLDGLDLLRQWRQAGHDVPVLILTA
RDALEQRVSGLQSGADDYLCKPFALTEVAARLQALIRRRHGQLMPQLVHGNVVFDTATRSVSCNGEPVTLTPRELAVLEL
FLHNKGRVLARPLIQEKLYNWDDEVSSNAVEVHIHHLRRKLGNGFIRTIHGVGYTLGDNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-33 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_3990 YP_001480213.1 two component transcriptional regulator BAC0487 Protein 1e-32 45
Spro_3990 YP_001480213.1 two component transcriptional regulator BAC0638 Protein 2e-22 43
Spro_3990 YP_001480213.1 two component transcriptional regulator BAC0347 Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_3990 YP_001480213.1 two component transcriptional regulator VFG0473 Protein 3e-32 44