Gene Information

Name : Spro_3978 (Spro_3978)
Accession : YP_001480201.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : iron-hydroxamate transporter ATP-binding subunit
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 4409363 - 4410160 bp
Length : 798 bp
Strand : -
Note : part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter

DNA sequence : 
ATGCAGGATAAACACCCCAATCACGACGCCACTTTTACGTTAGACAGCGCCAGCTTTGCCGTTCCCGGCCGCGTGCTGTT
GCAGCCGTTATCGCTGACCTTTCCCGTGGGAAAAGTCTGTGGGCTGATCGGCCATAACGGCTCCGGTAAATCCACGCTGC
TAAAAATCCTTGGTCGCCATCAAAGCCCCACCACCGGCAACGCGCTGCTTAACCAGCAGCTACTGGGCCAGTGGGACAGC
AAGGCCTTTGCGCGTCAGGTCGCCTATCTGCCCCAGCAACTGCCCGCTGCAGAAGGCATGACGGTGCGTGAACTGGTGGC
GATTGGCCGCTATCCGTGGCATGGCGCGCTGGGCCGTTTTGGCGCTAACGATCGTCAGCAGGTGGAGGAGGCGATTGCGC
TGGTGGGTTTGAAGCCATTTGCCAACCGCCTGGTGGACAGCCTGTCCGGCGGGGAGCGTCAACGCGCCTGGCTGGCGATG
ATGGTGGCGCAAGACAGCCGCTGTCTGCTGCTGGATGAACCTACCTCGGCACTGGATATCGCTCATCAGGTTGAGGTGCT
GGCGCTGATCCAGCAACTGAGCCGACAACGTGGCCTGACGGTGATTGCGGTACTGCACGATATCAATATGGCGGCGCGCT
ACTGCGACCATCTGGTGGCCTTGCGCGGCGGTGAGATGATTGCCCAGGGCAGCCCACTGGATCTGATGCAGGGCGAGGTG
CTGGAACAAATTTACGGTATTCCTATGGGAACGCTGCCACATCCAAGCGGCGGTGCGCCGGTGAGTTTTGTCTACTGA

Protein sequence : 
MQDKHPNHDATFTLDSASFAVPGRVLLQPLSLTFPVGKVCGLIGHNGSGKSTLLKILGRHQSPTTGNALLNQQLLGQWDS
KAFARQVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGANDRQQVEEAIALVGLKPFANRLVDSLSGGERQRAWLAM
MVAQDSRCLLLDEPTSALDIAHQVEVLALIQQLSRQRGLTVIAVLHDINMAARYCDHLVALRGGEMIAQGSPLDLMQGEV
LEQIYGIPMGTLPHPSGGAPVSFVY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 3e-40 43
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-43 41
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-37 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-37 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-37 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_3978 YP_001480201.1 iron-hydroxamate transporter ATP-binding subunit BAC0164 Protein 2e-40 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_3978 YP_001480201.1 iron-hydroxamate transporter ATP-binding subunit VFG1042 Protein 2e-40 43
Spro_3978 YP_001480201.1 iron-hydroxamate transporter ATP-binding subunit VFG0925 Protein 1e-41 41