Gene Information

Name : Spro_3885 (Spro_3885)
Accession : YP_001480109.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 4304518 - 4304724 bp
Length : 207 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory; KEGG: yen:YE0975A hypothetical protein

DNA sequence :
ATGCAACAAGAAGCACACACTCTCATTCGTTTACCTGCAGTTCAGCGGCGTACAGGCTACAGTAAAGCTTGGATCTATCG
TCTCATGTCTCAGGGGAAGTTTCCTCCATCCGTAAAAATTGGTACTCGCGCCATTGCTTTTGTTGAAAGAGAAATTGACG
ACTGGGTCAATCAACGCATTGCTGAATCTCGCAAGGAGGTTTCCTGA

Protein sequence :
MQQEAHTLIRLPAVQRRTGYSKAWIYRLMSQGKFPPSVKIGTRAIAFVEREIDDWVNQRIAESRKEVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 2e-06 46
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 2e-06 46
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-06 46
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 3e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_3885 YP_001480109.1 phage transcriptional regulator AlpA VFG1118 Protein 5e-07 46