Gene Information

Name : Spro_0376 (Spro_0376)
Accession : YP_001476612.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : Integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 423337 - 424161 bp
Length : 825 bp
Strand : +
Note : PFAM: Integrase catalytic region; KEGG: sec:SC173 hypothetical protein B

DNA sequence :
ATGTGTGGTGCGACCGGTCTGTCGCAACGTCGTGCCTGCAGGCTGACAGGTTTGTCCCTGTCGACCTGCCGCTATGAAGC
GCAGCGTCCGACGTCGGATGCGCATTTATCAGGGCGCATCACTGAACTGGCGCTTGAACGCAGGCGTTTTGGTTACCGGC
GCATCTGGCAGTTACTGCGTCGGGAGGGCGTTCACGTCAATCACAAGCGGGTATACCGCATTTACCATCTTAACAGCCTG
AGCGTAAAACGCAGACGACGTCGTAAAGGGCTGGCGACCGAGCGGTTTCCCCTTCTGCGCCCAGATGCGCCGAACCTGAC
CTGGTCGATGGATTTCGTCATGGACGCACTGGCCACCGGTCGCAGGATCAAGTGTCTGACCTGCGTGGATGATTTCACGA
AAGAGTGCCTGACGATCACCGCCGCTTTCGGGATTTCAGGCGTGCAGGTCATGCGTATTCTGGACAGCATTGCGCTGTTT
CGCGGCTATCCGGCGACGATAAGAACCGATCAGGGGCCGGAATTTACCTGCCGCGCATTGGAGCAATGGGCCTTTGAGCA
TGGCGTGGAGCTGCGGCTTATCCAGCCGGGCAAGCCGACCCAGAACGGATTTATTGAGAGTTTTAACGGACGCTTTCGCG
ATGAATGCCTGAATGAGCACTGGTTCAGCGATATTGTTCACGCCAGGAAAATCATTAATAACTGGCGACAAGATTATAAC
GAGTGCTGTCCTCATTCATCGCTGAACTACCAGACTCCAGCTGAATTTGCAGCTGGCTGGCGAAACAGGAAATATGAAGA
AAAACCAACCGACATTACTAACTGA

Protein sequence :
MCGATGLSQRRACRLTGLSLSTCRYEAQRPTSDAHLSGRITELALERRRFGYRRIWQLLRREGVHVNHKRVYRIYHLNSL
SVKRRRRRKGLATERFPLLRPDAPNLTWSMDFVMDALATGRRIKCLTCVDDFTKECLTITAAFGISGVQVMRILDSIALF
RGYPATIRTDQGPEFTCRALEQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEHWFSDIVHARKIINNWRQDYN
ECCPHSSLNYQTPAEFAAGWRNRKYEEKPTDITN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 2e-62 63
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-79 61
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 4e-44 58
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 3e-43 43
XCV0439 YP_362170.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 6e-37 43