Gene Information

Name : Spro_3867 (Spro_3867)
Accession : YP_001480091.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4279727 - 4281193 bp
Length : 1467 bp
Strand : +
Note : PFAM: aldehyde dehydrogenase; KEGG: ppu:PP_2487 aldehyde dehydrogenase family protein

DNA sequence :
ATGAATTTAGATAAAGAATACGGCCCACTGATCAACGGCGTTTTTGAGCTGAATAATACGGATCTGCATCCCATGATTTC
ACCCTCTACAGGGGAGAAACTCGCTGATTTGCATTACTGTAATGAACAGGATGTAGAACGAGCGGTATTGGCCGCCGAAG
CCGCATTTCCCGCCTGGAAAGCGCAGGGGCAGCAAGCTCGCGCGCAATTAGTTCTCAAGTTGGCAGATTTGCTGGAGAAT
GATTCGGAGCGAATGGCGCAAATGGATGCACTGGATGTGGGTCGCTGTATCAGCGAAGTACGTCGCGATTATCACACTGC
GGTGCGTCATTATCGCTACTTTGCTTCAGTGATCATGGGGCATGAGGATACCGGCAGAAGCATCGCCGACGGCTATAGCC
TGGCTAAGCGTGAGCCTCTCGGCGTTTGCGGGCAGATTATCCCGTGGAATGCACCGGCGATTATGGCTGCCTTCAAGCTG
GCACCAGCCTTGGTCACAGGTAACACTCTGGTGTTAAAAGTGGATGAAAATGCTTCGTTATCCACACTCGAACTGGGTAA
ACATATCAGTAACGTCTTTCCTGCCGGCGTGGTTAACATCATAACCGGATTAGGCAATGTGGTTGGCTCAGCCCTGACCG
GTAATAAAAAAGTCCGCAAGCTTTCGTTTACCGGTAGTACCGCAGTAGGCAGAATGGTGGCAAAAGCCGCAGCAGAAAGA
TTGGTGCCCGTCACGTTGGAGTTAGGGGGAAAAAGCCCCAATATCGTATTCCCCGATATCAGCGACATTGATGCGGTCGT
GGACAACGTCAGCTTTGCCGCGCTCCACAATAATGGCCAATCTTGTTTGGCCGGCACCCGCCTATTTGTTCATGCCGATA
TCTACGAGAGCTTCAGTGCCAAACTCGTTGAGTCATTCAAACGTGTGCGCATTGGCTCACCTTTAGATGAGCACTCCACA
GTCAGCTGCCTGGTGTCAGAAAAGCAAGGCAAGCGGGTACTTTCTTATATCCAAACCGGTATTGATGAAGGTGCCGCACT
GTTGGTGGGGGGAAACCGACGGGCGATTTCAGGCTGTGATAACGGGTATTTTATCGAACCGACAATTTTTGCCGCAGAGA
ATCATATGCAGATCTGTCAGGAAGAAATATTTGGCCCAGTGCTTACGCTAATCAAATGGTCCGATTATGACGAGATGATC
AAACAGGCCAATGACACCGAATATGGATTGGCATCGGGTATTTATACCAGCAGCCTGAAAAATGCCATGGAAACGGCCGA
TAAATTAGAGGCGGGTTCTGTCTGGATTAATCGCTATTCAAACATTACTGAGGGCACAGCCTTCGGGGGTTACAAGAATA
GCGGCATGGGTCGCGAGTTTTGCAAAGAAACCCTGAATGCCTACACGCAAATAAAAACCATAACCTTACAGGCGACACCG
CCTGAAGCCTGGTTCGCTGTTCGCTAA

Protein sequence :
MNLDKEYGPLINGVFELNNTDLHPMISPSTGEKLADLHYCNEQDVERAVLAAEAAFPAWKAQGQQARAQLVLKLADLLEN
DSERMAQMDALDVGRCISEVRRDYHTAVRHYRYFASVIMGHEDTGRSIADGYSLAKREPLGVCGQIIPWNAPAIMAAFKL
APALVTGNTLVLKVDENASLSTLELGKHISNVFPAGVVNIITGLGNVVGSALTGNKKVRKLSFTGSTAVGRMVAKAAAER
LVPVTLELGGKSPNIVFPDISDIDAVVDNVSFAALHNNGQSCLAGTRLFVHADIYESFSAKLVESFKRVRIGSPLDEHST
VSCLVSEKQGKRVLSYIQTGIDEGAALLVGGNRRAISGCDNGYFIEPTIFAAENHMQICQEEIFGPVLTLIKWSDYDEMI
KQANDTEYGLASGIYTSSLKNAMETADKLEAGSVWINRYSNITEGTAFGGYKNSGMGREFCKETLNAYTQIKTITLQATP
PEAWFAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 9e-77 42
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-77 42
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-77 42
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-77 42
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-76 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_3867 YP_001480091.1 aldehyde dehydrogenase VFG0082 Protein 4e-77 42