Gene Information

Name : Spro_0357 (Spro_0357)
Accession : YP_001476595.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 408555 - 409343 bp
Length : 789 bp
Strand : +
Note : PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: pst:PSPTO_B0039 transposase/IS protein

DNA sequence :
ATGAGCCTTCAGCATCAACGTATTAGCGAGCTCTGTGCCGACTTCAAGCTTGAACGTATTGCCAGTGAGTGGCCCGCACT
CGCCCCAAAAACACTGGAGGATACCGGGACGTTCGGCGACTTTTTGGAACAGCTTCTGCAACTGGAGACGAACAACCGTA
ACGAACGTCGCCGGCAGACGCTTTTGCGGTTATCAGGACTGCCAGCGGTTAAAACGCTGGAGCAGTTCGACTTCAAGTTC
GCCAGCGGTGCGCCGCGAGCTCAGCTTCAGGAACTCGCCGGACTGGCCTTCATAGAGCGGCACGAGAACATCGTGCTACT
GGGTCCTTCGGGCGTAGGCAAGAGCCATCTAGCCTGTGCGTTGGCACATAAAGTCGCGATGTCAGGTCAGAGTGTTCGCT
TTATAACGGCAGCAGACATGATGTTGCAGCTGGTCGCAGCTCACCGACAGGGAGAGCTCAAGGGATATTTAGGGCGCTGT
GTCAATAAGCCGCGACTGCTGGTGATTGATGAGGTGGGGTATCTGCCGTTCGGCAAGGAAGAGGCTAATTTATTCTTCCA
GGTTGTCGCCCGGCGCTATGAGACCGGAAGTCTGATCCTCACGAGTAATCTGCCGTTTACTCAGTGGTCAGGTACGTTTG
GTGATGATGAAACACTGACGGCAGCGATGTTAGACCGACTGCTTCACCACGCACACATAGTCCAGATAAGTGGTCAAAGC
TATCGCCTGAAAGATAAACTGAAAAGTGGTCAGTTAAAGAAATCGAAGGTCCCTGAACCACAGGAATAA

Protein sequence :
MSLQHQRISELCADFKLERIASEWPALAPKTLEDTGTFGDFLEQLLQLETNNRNERRRQTLLRLSGLPAVKTLEQFDFKF
ASGAPRAQLQELAGLAFIERHENIVLLGPSGVGKSHLACALAHKVAMSGQSVRFITAADMMLQLVAAHRQGELKGYLGRC
VNKPRLLVIDEVGYLPFGKEEANLFFQVVARRYETGSLILTSNLPFTQWSGTFGDDETLTAAMLDRLLHHAHIVQISGQS
YRLKDKLKSGQLKKSKVPEPQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-64 57
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 4e-64 56
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 5e-64 56
api84 CAF28558.1 putative transposase Not tested YAPI Protein 4e-64 56
unnamed CAA21402.1 - Not tested HPI Protein 5e-64 56
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-64 56
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 4e-64 56
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 4e-64 56
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 4e-64 56
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 5e-64 56
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 5e-64 56
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 8e-64 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_0357 YP_001476595.1 transposase/IS protein VFG1663 Protein 1e-64 57
Spro_0357 YP_001476595.1 transposase/IS protein VFG1627 Protein 2e-64 56
Spro_0357 YP_001476595.1 transposase/IS protein VFG1606 Protein 2e-64 56
Spro_0357 YP_001476595.1 transposase/IS protein VFG1515 Protein 2e-64 56