Gene Information

Name : Spro_3426 (Spro_3426)
Accession : YP_001479652.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3791628 - 3792431 bp
Length : 804 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ecj:JW0580 iron-enterobactin transporter subunit

DNA sequence : 
ATGAATGCTGAACCCCTGCAGTCCGCGCCGTTGCGCGCCGAACACCTGACGCTGGGCTACGACAAAAAGATTGTCGCCAG
CGACCTTTCCGTCGCTATCCCGCACGGCGAACTAACGGTGATTATCGGGCCGAACGCCTGCGGTAAATCGACTCTGCTGC
GCACCCTCAGCCGCCTGATGCAGCCGCAGGCCGGGGCTGTCTGGCTGAACGGCAAACACATCAGCGAATACGCCACCAAA
GAGGTGGCGCGCCAGTTGGGGCTGCTGCCGCAAAGCTCCACCGCGCCGGGTGATATCACCGTGTTTGATCTGGTGGCGCG
CGGTCGCTATCCGCATCAGCGCCTGTTCAGTCGTTGGAGCGAAGAAGACCAGCAGGCAGTGGACCAGGCGATGCGCTCCA
CCGGCGTATTCGAACTGGCCGAACAGCCGGTCGATACGCTCTCCGGCGGGCAAAGGCAACGAGTGTGGATTGCGATGGTG
CTGGCGCAGCAAACGCCGCTGCTGCTGCTGGATGAGCCGACCACCTGGCTGGACATCAGCCATCAGATCGATCTGCTGGA
GCTGATGCGTCAGCTAAACCGTGAAAACGGCCATACGCTGGTGGTGGTGCTGCACGACCTCAACCATGCCTGTCGTTACG
CCACGCATCTGATTGCCATGCGCGACGGTAAGGTGGTGGCCGAAGGGGCGCCGAAGGATATTGTGACCGCGGAACTGATC
GAAGAGGTGTACGGCCTGCGCTGCATGATCATTGACGATCCGGTCTCGCATACGCCGTTGGTGGTACCACTGGGTAAGTC
ATAA

Protein sequence : 
MNAEPLQSAPLRAEHLTLGYDKKIVASDLSVAIPHGELTVIIGPNACGKSTLLRTLSRLMQPQAGAVWLNGKHISEYATK
EVARQLGLLPQSSTAPGDITVFDLVARGRYPHQRLFSRWSEEDQQAVDQAMRSTGVFELAEQPVDTLSGGQRQRVWIAMV
LAQQTPLLLLDEPTTWLDISHQIDLLELMRQLNRENGHTLVVVLHDLNHACRYATHLIAMRDGKVVAEGAPKDIVTAELI
EEVYGLRCMIIDDPVSHTPLVVPLGKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-64 52
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-66 52
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-66 52
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 2e-66 52
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-66 52
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-63 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-63 49
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-51 48
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 41
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-52 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_3426 YP_001479652.1 ABC transporter-like protein BAC0164 Protein 8e-52 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_3426 YP_001479652.1 ABC transporter-like protein VFG0925 Protein 2e-96 73
Spro_3426 YP_001479652.1 ABC transporter-like protein VFG1042 Protein 8e-52 48