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Name : Spro_2874 (Spro_2874) Accession : YP_001479103.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 3153196 - 3155718 bp Length : 2523 bp Strand : + Note : PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_00277 putative fimbrial usher DNA sequence : ATGAGCACGGAAACAGACCGACGATATCGCCAAGTGCCTCTGGCGGGGCTAATAGTCTTGCAACTGGTGTTACAGCCGAC AGCACAAAGTCGTGATTATTTTAACCCGGCATTGCTGACTATTGGGACACCCCAACAGGATGGCGTGGACTTATCGGCAT TTGAGAACGCCGGTGGGCAAATACCCGGCGTTTATCGGGTCGATATTTTTCTTAATCAGCAAATGGTGGCGACACGCTCG GTGACTTTTCATGCCGACCCCAAGGGGGATGGCCTACAACCCTGCCTGAGCATGGCGGAACTGGGCGATTACGGCGTTCA GGTGAGTCGCTTTCCAACTCTGGGGGCCGCAGACAGCACCTGTGTCGATCTGACGGCAATACCACAGGCTTCATCACGTT TGCAGTTTAACCAGCAGCGGTTGCTGCTGAGCATTCCACAGGCGGCGATTAAACAGCAGCCGCGCGGTTATGTTTCCCCG GCACAATGGGACGAAGGCGTTCCAGCGCTATTACTTAACTATAGCCTGAGCGGGGCCAACACCTATGCCAGAAATGAGAG TGGGAGCAATGGCAACAATCAGTATGCCAACCTGCGCCCAGGAGCGAACCTCGGGCCATGGCGGTTGCGTAACTACACCA CCTGGGGTCGCGACAGTGACGGACAAGACAAGTGGAATACGGTTTATACCTACGCCCAGCGTAACCTGATTGGGTTACAG AGCCAGATGACATTGGGTGACAGCAACGCGCCCAGTGAGGTGTTTGACGCAGTGCCCTTCCGTGGCGGACAACTGGCTTC GGATGACGACATGCTACCGGATAGCCTGCGAGGTTATGCGCCGATAGTCCGCGGCATTGCCCGAACCAATGCCCAGGTGG TAGTACGCCAAAACGGCTATGAGATTTACCGTACCTATGTAGCGCCGGGGGCATTTGTTATTGACGATATGTACCCCACC GGCGGCAGCGGCGACCTGCATGTCACCATCAAAGAAGCCGATGGCAGCGAACAACAGCTAGTGGTGCCCTTCGCCTCCCT ACCCGTGTTGCAGCGTGAAGGACGGCTCAAATACAGCCTGACGGCAGGCCAATACCGCAGTTATGACCACAGCGTGGATA AAAGTGCCCTGATGCAGGGAACGGCCATTTATGGTCTGCCGTGGAACAGTACTTTGTATGGTGGCGTGCAGATGGCACAG CGTTACCAGTCGGCCGCACTGGGGGTGGGCAACAACCTTGGTGACTGGGGGGCATTCTCGGTGGATGTGACCCAGTCGCG GGGCCAGCAAAAAGGGCTGGACAGACAGACCGGGCAGTCGTGGCGTATGCGTTACAGCAAAAATATGGTGCAGACCGGCA CCAACTTCGCTATTGCCGGTTATCGCTATTCGACGGCGGGGTTTTATGCCCTGTCGGAGGTGTTGGACACCTGGCGTAGC GGAGAGATGGCCTACTGGGCGTATGAGCGGCGACGCAACCGGGCGGAACTGAGCATGAGCCAGCAGTTATGGCAGGACGG CGGTTCGCTCTCGCTCAGTGCGATACGCGAAGATTACTGGAACAGCGATCGCAGCATGGCCTCGTTGGGACTGGGCTACA GCAACAGTTGGCAAGGGATCAGCTACGGGGTGAACTGGAGTTATAACCGTAATAGTTTCGGGCCGCAGCGCAGTAACGAC CAGCAAATCGTCTTCAATCTCAACATGCCGCTAAACCTGTGGGACAACAACAGCAGTTGGGTGAACTACAACCTGAACAA TACCAAGGGCGGTGCGACCAGCCAGTCTCTGGGGCTGAGCGGGATGGCGCTACGGGATAACAGCCTGAGTTGGGCGGCGC AGCAGAATTATGGCAGCCGAGGGCAAGGTTACGGCGGCAACCTTAATCTGGACTATAAGGGGACTTACGGCGAGCTTAGC TCGGGCTACGGTTATGACCGCAACAGCCAGCGGCTGAATTATGGTCTGCAAGGCAGCGTGGTGGCGCATGCCAGTGGCGT GACCCTGGGGCAACCCCTGGGCGAGACGGCAGCGCTGGTGGCCATGCCCGGCGCAGCCGGTGTGAGCGTCAATAACCAGA CCGGTGTGCGCACTGACTGGCGTGGTTATGCGTTGGTGCCGTACCTGACCCCCTATCGCAGTACCGACGTCACGCTGGCG ACAGAAACCTTATCGGCAGATACCGACGTGGCACAAACCAGCCACCGTGTGGTACCCACGCGCGGAGCGCTGGTGAGGGC GACGTTCAGCGCCAAAGTGGGTGCGAGGGCGCTGATGACGCTAACGCAAGGCAATGGCAAGCCGGTGCCCTTTGGCGCCA CGGTGAGCGAAGCCGATCAAAACGCGGCACAAGGCAGCATCGTCGGTGATGCCGGGCAGGTCTACCTGAGTGGCCTCGCT GAGCAAGGGAAACTGAGGGTGCTATGGGGAAACGGCAATACCGGTCAGTGCTGGGTCAATTATCAATTGCCCACCACGCC CCAGCCGGGTGGCGTAGTGCAAATCAATGAGGTGTGCAGATGA Protein sequence : MSTETDRRYRQVPLAGLIVLQLVLQPTAQSRDYFNPALLTIGTPQQDGVDLSAFENAGGQIPGVYRVDIFLNQQMVATRS VTFHADPKGDGLQPCLSMAELGDYGVQVSRFPTLGAADSTCVDLTAIPQASSRLQFNQQRLLLSIPQAAIKQQPRGYVSP AQWDEGVPALLLNYSLSGANTYARNESGSNGNNQYANLRPGANLGPWRLRNYTTWGRDSDGQDKWNTVYTYAQRNLIGLQ SQMTLGDSNAPSEVFDAVPFRGGQLASDDDMLPDSLRGYAPIVRGIARTNAQVVVRQNGYEIYRTYVAPGAFVIDDMYPT GGSGDLHVTIKEADGSEQQLVVPFASLPVLQREGRLKYSLTAGQYRSYDHSVDKSALMQGTAIYGLPWNSTLYGGVQMAQ RYQSAALGVGNNLGDWGAFSVDVTQSRGQQKGLDRQTGQSWRMRYSKNMVQTGTNFAIAGYRYSTAGFYALSEVLDTWRS GEMAYWAYERRRNRAELSMSQQLWQDGGSLSLSAIREDYWNSDRSMASLGLGYSNSWQGISYGVNWSYNRNSFGPQRSND QQIVFNLNMPLNLWDNNSSWVNYNLNNTKGGATSQSLGLSGMALRDNSLSWAAQQNYGSRGQGYGGNLNLDYKGTYGELS SGYGYDRNSQRLNYGLQGSVVAHASGVTLGQPLGETAALVAMPGAAGVSVNNQTGVRTDWRGYALVPYLTPYRSTDVTLA TETLSADTDVAQTSHRVVPTRGALVRATFSAKVGARALMTLTQGNGKPVPFGATVSEADQNAAQGSIVGDAGQVYLSGLA EQGKLRVLWGNGNTGQCWVNYQLPTTPQPGGVVQINEVCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 1e-151 | 42 |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 5e-149 | 42 |
| lpfC | YP_006098365.1 | fimbrial outer membrane usher protein | Not tested | Tn2411 | Protein | 4e-148 | 42 |
| lpfC | NP_839216.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 1e-147 | 42 |
| lpfC | NP_709462.1 | long polar fimbriae | Not tested | SHI-2 | Protein | 1e-147 | 42 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 3e-153 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spro_2874 | YP_001479103.1 | fimbrial biogenesis outer membrane usher protein | VFG0454 | Protein | 2e-174 | 45 |
| Spro_2874 | YP_001479103.1 | fimbrial biogenesis outer membrane usher protein | VFG0944 | Protein | 8e-160 | 44 |
| Spro_2874 | YP_001479103.1 | fimbrial biogenesis outer membrane usher protein | VFG0853 | Protein | 8e-157 | 42 |
| Spro_2874 | YP_001479103.1 | fimbrial biogenesis outer membrane usher protein | VFG0446 | Protein | 3e-150 | 42 |
| Spro_2874 | YP_001479103.1 | fimbrial biogenesis outer membrane usher protein | VFG0876 | Protein | 4e-155 | 42 |
| Spro_2874 | YP_001479103.1 | fimbrial biogenesis outer membrane usher protein | VFG0849 | Protein | 6e-145 | 41 |
| Spro_2874 | YP_001479103.1 | fimbrial biogenesis outer membrane usher protein | VFG0857 | Protein | 4e-152 | 41 |
