Gene Information

Name : Spro_2873 (Spro_2873)
Accession : YP_001479102.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : pili assembly chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3152467 - 3153147 bp
Length : 681 bp
Strand : +
Note : PFAM: pili assembly chaperone; KEGG: sec:SC0176 putative fimbrial chaparone

DNA sequence : 
ATGAAAGCATTGCAGGTCGCGCTGTACCTTGGGTTGATATTGAGCAGCAGTCTGGTACAGGCTGGTGTGGTGATTGGGGC
AACCCGAGTGGTGTACGACGGCGGATTGCGGGAATCCTCATTAAGCGTCAGTAACCCGGATAAAGTCCCTTACCTGATCC
AGTCCTGGGTCGATCCACAAACCGCAGGCAGCGAGAAAGCCCCGTTTATCCTGACACCCCCACTGTTTCGTTTAGAAGGG
GGGGACAAGAACGTACTGCGAATAGTGCGCCTGGGCGGCAATTTGCCAAAAGACCGTGAATCGCTGTACTGGTTGAATGT
GAAAGCCATTCCTTCGTCTGAGAATAAAGACAATACCCTCCAAATAGCGGTGAACACCCGCATCAAACTGATATATCGCC
CAGAACAGTTGAAAGACAAATCGCCGGAGGCGGTTGCCGGGCAATTGAGCTGGTCACGGCAAGGCGGAAAATTGCGGGTC
AACAACCCTACACCGTATTACATGAACTTTCAGAGTGTGAAGATCGAGGGGCAAGAGGTGCGGGATGCAACCTATGTCGC
GCCATTCAGCAGTGCGGATTTTGCTTTGCAAGAAGTGAAAGCAGGCAATGCGGTGAGTTGGATCGTTATCAACGATTTTG
GCGGTAGCGGTGCCACCCTGCAAGGCAGATTAGCAGGGTGA

Protein sequence : 
MKALQVALYLGLILSSSLVQAGVVIGATRVVYDGGLRESSLSVSNPDKVPYLIQSWVDPQTAGSEKAPFILTPPLFRLEG
GDKNVLRIVRLGGNLPKDRESLYWLNVKAIPSSENKDNTLQIAVNTRIKLIYRPEQLKDKSPEAVAGQLSWSRQGGKLRV
NNPTPYYMNFQSVKIEGQEVRDATYVAPFSSADFALQEVKAGNAVSWIVINDFGGSGATLQGRLAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 2e-40 43
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 4e-36 42
lpfB YP_006098366.1 fimbrial chaperone protein Not tested Tn2411 Protein 2e-37 42
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 7e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_2873 YP_001479102.1 pili assembly chaperone VFG0943 Protein 4e-32 43
Spro_2873 YP_001479102.1 pili assembly chaperone VFG1644 Protein 4e-33 41
Spro_2873 YP_001479102.1 pili assembly chaperone VFG0911 Protein 4e-33 41