Gene Information

Name : Spro_2833 (Spro_2833)
Accession : YP_001479062.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 3110111 - 3110497 bp
Length : 387 bp
Strand : +
Note : PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: yen:YE1753 AraC-family transcriptional regulatory protein

DNA sequence : 
ATGATACAAGAACACCACCTCTCATTGGTCTGCGCCCTCAGTAAATGGGTCGAAACTCACCTTGGAAGAGTGATCCATCT
TGAAGAGCTGGCCGAATACTCCGGCTACTCTCTGTGGCACATGCAGAAGTTGTTCAAAGAAGCGACCGGGATTTCGCTGG
GCAAGTACATCCGCGAACGCAGGCTGGCCGGTGCGGTTTACCAGTTGCGAAGCAGTGACGCCTCTATTTTCGACATCGCC
CTCGATTTTGGTTTCGGCTCACAGTCACACTTTACTTATATGTTCAGAAAGCGCTTCGATATCACGCCTTATGATTTTCG
TCAGGATTTAAGCGTGGATCTGCATATTGCTCCACCGCTGCACGTCATTCATCAAAAGACCGCCTGA

Protein sequence : 
MIQEHHLSLVCALSKWVETHLGRVIHLEELAEYSGYSLWHMQKLFKEATGISLGKYIRERRLAGAVYQLRSSDASIFDIA
LDFGFGSQSHFTYMFRKRFDITPYDFRQDLSVDLHIAPPLHVIHQKTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
soxS YP_219131.1 DNA-binding transcriptional regulator SoxS Not tested SPI-4 Protein 2e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_2833 YP_001479062.1 AraC family transcriptional regulator CP001918.1.gene2033. Protein 2e-16 43
Spro_2833 YP_001479062.1 AraC family transcriptional regulator CP000034.1.gene4505. Protein 9e-20 41
Spro_2833 YP_001479062.1 AraC family transcriptional regulator NC_002695.1.914293.p Protein 4e-20 41
Spro_2833 YP_001479062.1 AraC family transcriptional regulator CP001918.1.gene327.p Protein 2e-19 41
Spro_2833 YP_001479062.1 AraC family transcriptional regulator CP001138.1.gene4488. Protein 6e-20 41
Spro_2833 YP_001479062.1 AraC family transcriptional regulator BAC0371 Protein 4e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_2833 YP_001479062.1 AraC family transcriptional regulator VFG0585 Protein 5e-20 41