Name : araD (Spro_2644) Accession : YP_001478873.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : 5.1.3.4 Position : 2913890 - 2914585 bp Length : 696 bp Strand : - Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source DNA sequence : ATGCTTAACGAACTCAAGCAGCAGGTATTAGAGGCCAACCTGGCCTTGCCACGCCATCATCTGGTGACTTTCACCTGGGG TAACGTCAGTGCTGTCGATCGCCGTGAGGGGCTGATGGTGATCAAACCGTCGGGGGTAGAGTATGCATTGATGACCCGTG ACGATATGGTGGTGGTGGAACTAGAAAGCGGCAAAGTGGTGGAAGGGAGTAAAAAGCCGTCATCGGACAGCGATACCCAT CGCGTGTTGTACCTGGAGTTTGCCGCTGCCGGGGGGATTGTTCATACTCATTCGCGGCATGCCACCATCTGGGCGCAGGC GGGGCTGGATATTCCTGCCTGGGGCACCACCCACGCCGATTATTTTTATGGTGATATCCCCTGTACCCGCCAGATGCACA ATGAGGAAATCAATGGCCGCTACGAGTGGGAAACCGGCCGGGTGATCGTCGAAACCTTTGCAGAACGCCAGTTGGATCCG GCGGCGATACCGGCGGTGCTGGTGCATTCGCACGGTCCCTTTACCTGGGGAAAGGATGCGGAAAACGCGGTGCACAATGC GGTGGTACTGGAAGAGATTGCCTACATGGGGATTTTTTCGAGCCAACTGACACCGGGGCTGGCGAACATGCAGCAGACGC TATTGGACAAACATTACCTGCGTAAGCACGGTAAAAATGCCTATTACGGTCAGTAA Protein sequence : MLNELKQQVLEANLALPRHHLVTFTWGNVSAVDRREGLMVIKPSGVEYALMTRDDMVVVELESGKVVEGSKKPSSDSDTH RVLYLEFAAAGGIVHTHSRHATIWAQAGLDIPAWGTTHADYFYGDIPCTRQMHNEEINGRYEWETGRVIVETFAERQLDP AAIPAVLVHSHGPFTWGKDAENAVHNAVVLEEIAYMGIFSSQLTPGLANMQQTLLDKHYLRKHGKNAYYGQ |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 1e-59 | 57 |