Gene Information

Name : Spro_2520 (Spro_2520)
Accession : YP_001478749.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : L-lysine 6-monooxygenase (NADPH)
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG3486
EC number : 1.14.13.59
Position : 2766778 - 2768055 bp
Length : 1278 bp
Strand : -
Note : KEGG: ypi:YpsIP31758_0711 aerobactin siderophore biosynthesis protein IucD

DNA sequence :
ATGAACCCGTGTTTGGACTTTATCGGTATTGGCATCGGTCCGTCCAACCTCAGTATTGCTGCCCTTGGCAGCGAAATCGA
AGGTTTTAATTGCAAATTCCTCGAGCGCAAATCGCAGTTTTCATGGCATCCAGGCATGATCCTGGCGGAATGCAGTATGC
AGACCAGTTTTTTGAAGGATTTGGTGACCGCCGTCTCGCCAACCAACCCTTTTAGCTTCCTAAACTATCTGGTGAAAAGG
AAAAAGTTCTACCGTTTCCTGACAACAGAACAACGCACGGTGTCACGTGAAGAGTTTGCCGATTATCTCAACTGGGCTGC
CACGGGGCTGGATTCGCTGGTTTTCAACCAGGACGTTCAGCGCGTGGAGTTTGATAGCCAACAGCGGCAGTATGTTGTCA
CCACTCAGAATCAGGTGTTTTACGCTAAACATGTCTGCGTGGGCATTGGCAAGAAAGTCAAACTGCCTGACTGCGTGACC
GAACAAAATGCTCAATGTTTTCACGCCAGCGAAATGATGTTTCGCCAGCCAAACCTTAGCGGGAAACGCGTGGCCATTGT
GGGCGGGGGGCAAAGCGGAGCCGATCTGTTCCTTAATATTTTTCAGGGAGAGTGGGGCCAGCCAGAGCAACTGAGTTGGA
TCTCCCGGCGTAACAACTACAACGCTCTTGATGAAGCGGCCTTTGCTAACGAGTATTTTACGCCCGATTATGTCGACGAC
TTCTACACGCTCAGCAACACCGCCAAACAGCAGATGCTGCGCGAACAAAAAATGACCTCCGATGGCATCACCAGCGAGTC
TCTTTTAGCTATTTATCGCGCCATGTATCACCGTTTCGATGTTCTGCAAGAAAAACGCTGGGTACGCCTGCTACCCAGCC
GCTCAGTGACGGCCCTTAATGCCCAGGATAATTTTTATCGGTTGGAGACGCAGCATCATCTTGACCAGGGGCGCGAGACC
CTGGATGCCGATGTGGTTATCTTTGCTACCGGTTATGAACAGGCTCAACCGGCTTTTCTTGCCTCCCTGGCGGACCGGAT
GTTAACCGATGCCGATGGGCAATATCGTATTGCCTCTGATTTTACTCTGGAGCGTGAGGGGGAGCATGAGAATGCTCTAT
TTGCCGTCAATGCCAGCATGCACCACCACGGGATTGCCGATCCTCAGCTCAGTCTGGTGGCCTGGCGATCGGCCCGTATC
CTCAATCGGGTGCTGGGCGAGAATAAATTTGATCTGAGTACCGCGCCTGCGATGATTCAATGGCGTAGTGAGCAATAA

Protein sequence :
MNPCLDFIGIGIGPSNLSIAALGSEIEGFNCKFLERKSQFSWHPGMILAECSMQTSFLKDLVTAVSPTNPFSFLNYLVKR
KKFYRFLTTEQRTVSREEFADYLNWAATGLDSLVFNQDVQRVEFDSQQRQYVVTTQNQVFYAKHVCVGIGKKVKLPDCVT
EQNAQCFHASEMMFRQPNLSGKRVAIVGGGQSGADLFLNIFQGEWGQPEQLSWISRRNNYNALDEAAFANEYFTPDYVDD
FYTLSNTAKQQMLREQKMTSDGITSESLLAIYRAMYHRFDVLQEKRWVRLLPSRSVTALNAQDNFYRLETQHHLDQGRET
LDADVVIFATGYEQAQPAFLASLADRMLTDADGQYRIASDFTLEREGEHENALFAVNASMHHHGIADPQLSLVAWRSARI
LNRVLGENKFDLSTAPAMIQWRSEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 5e-134 60
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 5e-134 60
iucD AAD44749.1 IucD Virulence SHI-2 Protein 3e-134 60
iucD AAK71634.1 IucD Virulence SHI-3 Protein 3e-134 59
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 8e-134 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_2520 YP_001478749.1 L-lysine 6-monooxygenase (NADPH) VFG0618 Protein 2e-134 60
Spro_2520 YP_001478749.1 L-lysine 6-monooxygenase (NADPH) VFG1084 Protein 2e-134 59
Spro_2520 YP_001478749.1 L-lysine 6-monooxygenase (NADPH) VFG0937 Protein 3e-134 59