Gene Information

Name : Spro_0025 (Spro_0025)
Accession : YP_001476263.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : L-lysine 6-monooxygenase (NADPH)
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG3486
EC number : 1.14.13.59
Position : 23811 - 25124 bp
Length : 1314 bp
Strand : -
Note : KEGG: sbo:SBO_4340 lysine:N6-hydroxylase

DNA sequence :
ATGAATGAACCACTGGATTTACTGGGTGTCGGCCTTGGCCCCTTCAACCTCAGCCTGGCCGCGCTGGCCTATGAAAGTGG
CGTCCTCAATTACACCTTTCTCGATCGAAACGCCAGCTTCCGCTGGCACCCCGGCATGCTGCTGCCTTCCGCCTATATGC
AGACCTATGTACTGCAGGACCTGGTTACGGCGGTAACACCCCGTAGCCAATTCTCCTTTATCAATTACCTGGTCGAGCAG
AAAAAAATCTATCGTTTTTTGATCACCGAACAGCAAATTATCAGCCGTGAAGAGTTCTCCGACTACCTGAGTTGGGCCTG
CGATAGATTAGATGGGCTACAGTTTTCACAGTCGGTTGAAAGTATTGATTTTGACGATGACAAGCAGCTGTTCGAAGTCC
GCACCATCAACCAGACTTTGTGGGCAAAGAATATCTGCCTGGGTACCGGCCACGACCCCTGGCTGCCGGAGGAGTTTTAC
CCTGCGCTGGGCGAAAACTGCCTGCATGCCGCCGAAATTGCCATTCGCAACCCGGATCTGACCGGTAAGCGGGTCACCGT
TGTCGGGGGAGGCCAAAGTGGTGCAGATATTTTCCTGAACGCGCTACGCGGCCATTGGGGAGAAGCCGCACAGCTGGACT
GGATTTCCCGCCGGCCTAACTTCCAACCGCTGGACGAGTCCGCCTTCACCAATGAATATTTCACCCCGGAATACGTCGAT
TATTTTTATACGCTGCCGCAGGAAATCCGCGAACGCGAAATTAAGGCTCAGAAGTTACCTGCAGACGGCATCAGTAATCA
TACGCTGCGTACGCTGTACCGCGAGTTGTACCTGCGTTTCGACGTAATGCACCAGCCGCGTAATGTGCGTCTTTTACCAC
ACCGTACGCTGCTGGCGATCGAACCGACGGACAAAGGCTATCAATTACGCACCCGCCACGGTTTGGAAAACCGCCAGGAA
GGGTTTCACGCCGACGTCGTCATTTTAGCGACAGGTTACCGCCCTTCGCTGCCGTCCTGCCTAAAGCCGCTGCTGTCACG
CATTCCTTTCGACAACAAACAGCGCTTGCCGCTACAGCCGGATTTTAACCTTGAGTGGCAGGGGCCTGAACAGAATCGTA
TTTATGCGGTGAATGCCGGAATACATAGCCACGGCAGCGCAGAAGGGGGACTCAGCCTGATGGCCTGGCGCTCGGCCCGC
ATCCTCAATCATCTGCTCGGCAAACCCCATTTTGATCTGACGCCGAACGCATCGATGATCCAATGGTGGAGTGATGCTCC
TCCGGACAATGATATTGCTTATCCAGATAAATAG

Protein sequence :
MNEPLDLLGVGLGPFNLSLAALAYESGVLNYTFLDRNASFRWHPGMLLPSAYMQTYVLQDLVTAVTPRSQFSFINYLVEQ
KKIYRFLITEQQIISREEFSDYLSWACDRLDGLQFSQSVESIDFDDDKQLFEVRTINQTLWAKNICLGTGHDPWLPEEFY
PALGENCLHAAEIAIRNPDLTGKRVTVVGGGQSGADIFLNALRGHWGEAAQLDWISRRPNFQPLDESAFTNEYFTPEYVD
YFYTLPQEIREREIKAQKLPADGISNHTLRTLYRELYLRFDVMHQPRNVRLLPHRTLLAIEPTDKGYQLRTRHGLENRQE
GFHADVVILATGYRPSLPSCLKPLLSRIPFDNKQRLPLQPDFNLEWQGPEQNRIYAVNAGIHSHGSAEGGLSLMAWRSAR
ILNHLLGKPHFDLTPNASMIQWWSDAPPDNDIAYPDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 9e-104 53
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 9e-104 53
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 5e-104 53
iucD AAD44749.1 IucD Virulence SHI-2 Protein 6e-104 53
iucD AAK71634.1 IucD Virulence SHI-3 Protein 3e-104 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_0025 YP_001476263.1 L-lysine 6-monooxygenase (NADPH) VFG0937 Protein 2e-104 53
Spro_0025 YP_001476263.1 L-lysine 6-monooxygenase (NADPH) VFG0618 Protein 4e-104 53
Spro_0025 YP_001476263.1 L-lysine 6-monooxygenase (NADPH) VFG1084 Protein 2e-104 53