Gene Information

Name : Spro_2390 (Spro_2390)
Accession : YP_001478619.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2611037 - 2612326 bp
Length : 1290 bp
Strand : -
Note : TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: ent:Ent638_4256 arsenical pump membrane protein

DNA sequence :
ATGTTACTGGCAGGGAGTCTCTTTTTACTGACGCTGATTCTGGTCATCTGGCAGCCCAGAGGACTCAGCATTGGCTGGAG
TGCGAGTCTAGGTGCCGTGCTGGCATTGGTCTGTGGTGTTATCCACCTTGATGACATTCCTGTCGTCTGGAATATCGTCT
GGAATGCCACGGCAACCTTTATCGCGGTGATCATCATCAGCCTGCTGCTCGACGAGTCGGGCTTCTTTGAATGGGCCGCA
CTGCATGTTTCCCGCTGGGGCAAGGGACGAGGACGTTTACTTTTCACCTGGATTATATTGCTGGGTGCGACGGTCGCCGC
CTTGTTCGCCAACGATGGCGCAGCGCTTATCCTGACGCCAATCGTCATTGCCATGTTGCTTGCGCTGGGTTTCAGCCAAG
GAACAACGCTGGCCTTCGTGATGGCAGCCGGGTTTATCGCGGATACGGCCAGTTTGCCGCTAATCGTTTCAAACCTGGTG
AATATTGTCTCTGCTGACTTTTTCCAGCTCGGTTTTACGCAATACGCATCGGTGATGATCCCGGTGGATATTGCCGCTAT
AGCCGCTACGCTGGTCATGCTGCACCTGTTTTTCCGCAAGGACATCCCGGCGACCTACGACGTAGCGCTATTGAAAACAC
CTGCCAGCGCCATTAAAGATCCGGCAACGTTTAAAGCCGGCTGGATTGTCCTTGTGCTGCTGCTGGTGGGTTTTTTCGTT
CTTGAGCCGTTAGGGCTCCCCGTCAGTGCCATTGCCGCTGCTGGCGCTGTCGTCCTGTTTGCCGTAGCGAAAAGAGGCCA
TGCCATTAATACCGGGAAAGTGTTGCGAGGGGCACCCTGGCAGATCGTTGTCTTCTCGCTGGGGATGTACCTGGTGGTCT
ACGGACTGCGGAATGCTGGGCTGACAGATTACCTTTCCGGTGTTCTCAATATACTGGCAGATAAAGGACTATGGGCTGCA
ACATTGGGCACCGGCTTCCTGACGGCATTGTTGTCGTCGGTCATGAATAATATGCCTACCGTACTGATTGGCGCATTGTC
GATTGACGGCAGCACGGCCTCCGGTGTCATCAAAGAGGCGATGGTTTATGCCAACATCATAGGCTGCGATTTAGGTCCAA
AAATCACGCCTATTGGCAGCCTCGCCACACTGCTGTGGCTCCATGTGCTTTCACAAAAAAATATGACGATCACCTGGGGA
TATTACTTCCGTACCGGCATCGTCATGACCCTGCCCGTTCTGTTTGTCACTCTGGCCGCCCTGGCGTTGCGGCTCTCCGT
TACTTTCTAA

Protein sequence :
MLLAGSLFLLTLILVIWQPRGLSIGWSASLGAVLALVCGVIHLDDIPVVWNIVWNATATFIAVIIISLLLDESGFFEWAA
LHVSRWGKGRGRLLFTWIILLGATVAALFANDGAALILTPIVIAMLLALGFSQGTTLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFQLGFTQYASVMIPVDIAAIAATLVMLHLFFRKDIPATYDVALLKTPASAIKDPATFKAGWIVLVLLLVGFFV
LEPLGLPVSAIAAAGAVVLFAVAKRGHAINTGKVLRGAPWQIVVFSLGMYLVVYGLRNAGLTDYLSGVLNILADKGLWAA
TLGTGFLTALLSSVMNNMPTVLIGALSIDGSTASGVIKEAMVYANIIGCDLGPKITPIGSLATLLWLHVLSQKNMTITWG
YYFRTGIVMTLPVLFVTLAALALRLSVTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-151 90
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-100 58
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 3e-98 58
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 1e-98 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_2390 YP_001478619.1 arsenical pump membrane protein BAC0577 Protein 3e-154 92
Spro_2390 YP_001478619.1 arsenical pump membrane protein BAC0031 Protein 5e-152 90
Spro_2390 YP_001478619.1 arsenical pump membrane protein BAC0576 Protein 8e-152 90
Spro_2390 YP_001478619.1 arsenical pump membrane protein BAC0578 Protein 1e-151 90
Spro_2390 YP_001478619.1 arsenical pump membrane protein BAC0574 Protein 1e-100 59
Spro_2390 YP_001478619.1 arsenical pump membrane protein BAC0575 Protein 2e-100 58