Gene Information

Name : Spro_2166 (Spro_2166)
Accession : YP_001478395.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : transport system permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2363078 - 2364082 bp
Length : 1005 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: yen:YE0328 hemin transport system permease protein HmuU

DNA sequence : 
ATGCGCTGCCGTACCTCTCCCCGCCTGGCGATGACCAGCCTGCTGGTACTGTTGGCACTATTGGCTTTGGGCGCGGCCAA
TATGGGGGCGCTGACGCTGTCATTCCGCACCCTGTGGCAACAGCCGTTCAGCGACACCTCCTGGCATATCTGGCTGAATA
TCCGTTTGCCGCGTGTGCTGCTGGCGGTAGTGATAGGTTGCGCGTTGGCGGTGTCCGGCGCCGTGATGCAGGGATTGTTC
CGTAATCCCTTGGCCGATCCCAGCCTGTTGGGGATCAGTAGCGGCGGCGCGCTGTTTGTCGCGCTGATTATCGTTATGCC
GCTGGCCCTGCCGCCGGTGATTGCCCTGTATGGCCACATGCTGGCGGCATTTCTCGGCAGCATGCTGGTATCGCTGTTGA
TTTACGGCATCAGCCGCAGCGGCCACGGCAGCCTGTCGCGCCTGTTGCTGGCGGGTATCGCCATTAACGCCCTGTGCATG
GCAGCGATTGGCGTGCTGTCTTACCTCAGTAATGACCAGCAACTGCGCCAGTTTTCACTGTGGATGATGGGCAGCCTGAG
CCAGTCACAATGGCCCACCCTGGCCGTTTCCGCCTCGCTGATCCTGCCGACCATCCTGCTGACACTCTTACAGGCGCGCC
GCCTGAATCTGCTGCAACTGGGAGATGAGGAGGCGCATTACCTCGGTGTGAATGTTCAGCGTGCCAAGTTACAGCTGCTG
TTGTTGAGCGCATTACTGATAGGCGCAGCGGTAGCGATGAGTGGCGTGATTGGTTTTATCGGTCTGGTGGTGCCGCATCT
GGTGCGCATGCGCCTCGGCGGCGACCACCGCTGGCTGCTGCCCTGTTCTGCACTGGGGGGAGCCTGCCTGCTGTTGGTCA
GCGATACGCTGGCACGCACGCTGGTGGCTCCGGCAGAAATGCCGGTCGGTTTGATGACCAGCCTGATCGGCGGGCCTTAT
TTCTTATGGCTGGTGATGCGCCAGCGGGAGCGCGTGGGTGGATAA

Protein sequence : 
MRCRTSPRLAMTSLLVLLALLALGAANMGALTLSFRTLWQQPFSDTSWHIWLNIRLPRVLLAVVIGCALAVSGAVMQGLF
RNPLADPSLLGISSGGALFVALIIVMPLALPPVIALYGHMLAAFLGSMLVSLLIYGISRSGHGSLSRLLLAGIAINALCM
AAIGVLSYLSNDQQLRQFSLWMMGSLSQSQWPTLAVSASLILPTILLTLLQARRLNLLQLGDEEAHYLGVNVQRAKLQLL
LLSALLIGAAVAMSGVIGFIGLVVPHLVRMRLGGDHRWLLPCSALGGACLLLVSDTLARTLVAPAEMPVGLMTSLIGGPY
FLWLVMRQRERVGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecD AAL08452.1 FecD Virulence SRL Protein 8e-21 42
fecC AAL08453.1 FecC Virulence SRL Protein 7e-23 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_2166 YP_001478395.1 transport system permease BAC0163 Protein 5e-21 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_2166 YP_001478395.1 transport system permease VFG0922 Protein 1e-71 64
Spro_2166 YP_001478395.1 transport system permease VFG1043 Protein 5e-21 42
Spro_2166 YP_001478395.1 transport system permease VFG1044 Protein 4e-23 42