Gene Information

Name : Spro_2133 (Spro_2133)
Accession : YP_001478362.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2328409 - 2329353 bp
Length : 945 bp
Strand : -
Note : PFAM: periplasmic solute binding protein; KEGG: eca:ECA2392 periplasmic chelated iron-binding protein

DNA sequence : 
ATGTTTATGAAACAAAGCGCTTTTCCCCGCCTATCCATTATTAAGCCCTGCGGCTTTTTCCGCCCTGTCGCCCTGCTGTG
CCTGTTACTGACTGCCGGCCTCGCCAGCCAGGCCGCATTGGCAGAAAAAAAACTGCGCGTGGTAACCACCTTTACCATCA
TTCAGGATATCGCCCAGAACGTGGCCGGTGACGCCGCCGTGGTAGAGTCGATCACCAAACCGGGCGCAGAAATCCACGAT
TACCAACCGACGCCGCGCGATATCGTCAAGGCGCAGCACGCCGACCTGATCCTGTGGAACGGCATGAATCTGGAACGCTG
GTTCCAGCGCTTCTTCGAGAACATCAAACAGGTGCCGGCTGCGGTCGTCACCGAAGGTATCACCCCGCTGCCGATCCGCG
AAGGGCCGTATAACGGCAACCCGAATCCGCACGCCTGGATGTCCGCCAGCAACGCGCTGGTGTATATCGAGAATATTCGT
AAGGCGCTGGTGCAGCACGACCCGGCCAACGCAGAAACCTATAACCGCAATGCCAAGGCCTATGCCGCCAAAATTGCCGC
GTTGGACGCACCGCTGCGCGAACGTCTGGCACGCATCCCGGCAGCCCAGCGTTGGTTGGTGACCAGTGAAGGTGCCTTCA
GCTATCTGGCAAAAGACTATCAGTTGAAAGAAGTGTATCTGTGGCCAATCAACGCCGATGAGCAAGGCTCACCGCAGCAG
GTTCGCCGGGTGATCGACGCCGTGCGCGCCAACCACATCCCGGTGGTATTCAGCGAAAGCACCATTTCCGACAAACCTGC
CAAACAGGTCGCCAAAGAGACCGGTGCAAAATACGGCGGCGTACTCTATGTCGATTCACTGTCTGCTCAGGGTGGCCCGG
TGCCGACTTATATCGACCTGCTCAATGTCACCGTACAAACCATTGCCAAAGGATTTGATCAATGA

Protein sequence : 
MFMKQSAFPRLSIIKPCGFFRPVALLCLLLTAGLASQAALAEKKLRVVTTFTIIQDIAQNVAGDAAVVESITKPGAEIHD
YQPTPRDIVKAQHADLILWNGMNLERWFQRFFENIKQVPAAVVTEGITPLPIREGPYNGNPNPHAWMSASNALVYIENIR
KALVQHDPANAETYNRNAKAYAAKIAALDAPLRERLARIPAAQRWLVTSEGAFSYLAKDYQLKEVYLWPINADEQGSPQQ
VRRVIDAVRANHIPVVFSESTISDKPAKQVAKETGAKYGGVLYVDSLSAQGGPVPTYIDLLNVTVQTIAKGFDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-87 67
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-87 67
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-87 67
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-87 67
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 1e-87 67

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_2133 YP_001478362.1 periplasmic solute binding protein BAC0439 Protein 5e-106 84
Spro_2133 YP_001478362.1 periplasmic solute binding protein BAC0349 Protein 8e-88 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_2133 YP_001478362.1 periplasmic solute binding protein VFG0525 Protein 7e-88 67