Gene Information

Name : Spro_1770 (Spro_1770)
Accession : YP_001478002.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1947664 - 1948032 bp
Length : 369 bp
Strand : -
Note : PFAM: protein of unknown function DUF1219; KEGG: yps:YPTB3866 hypothetical protein

DNA sequence :
ATGAAGACTTCACCTTTCCCCCCTAAACGGGAGGTTTACTCCTGCCCATCACCCGTTGCCATCTGGCGGGATCTGCTTAC
GTATCTGCTGGCACAACATTACGGTCTGACTGTGAACGACACTGTGTTCAGTGATGACACAATCATTCAGGAACATATTG
AGGCCGGTATATCACTGGCTGATGCCCTGAATTTTATCGTGGAAAAGTTCGACCTGGTACGCACTGACCGTCGGGGATTC
TCATGCACGGAACAATCACCGTTTATCACTGCCATCGATATCTTGCGGGCCCGTCACGCCACCGGACTAATGACACGCAA
CGGATATCAGGTCATCACGCAGGCTATCCAGGGGGAAAAGCGACCATGA

Protein sequence :
MKTSPFPPKREVYSCPSPVAIWRDLLTYLLAQHYGLTVNDTVFSDDTIIQEHIEAGISLADALNFIVEKFDLVRTDRRGF
SCTEQSPFITAIDILRARHATGLMTRNGYQVITQAIQGEKRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 5e-32 62
yeeV AAZ04461.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 1e-30 62
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-31 61
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 8e-31 61
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 8e-31 61
unnamed AAL57575.1 unknown Not tested LEE Protein 8e-30 60
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-30 60
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 4e-31 60
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 2e-30 60
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 5e-31 60
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 1e-30 60
unnamed AAL08478.1 unknown Not tested SRL Protein 1e-29 60
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 9e-30 60
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 3e-30 60
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 5e-31 59
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 4e-31 59
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 5e-31 59
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 1e-29 59
unnamed AAC31486.1 L0007 Not tested LEE Protein 7e-30 59
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 7e-30 59
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 1e-29 59
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 2e-29 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1770 YP_001478002.1 hypothetical protein VFG1530 Protein 5e-31 60
Spro_1770 YP_001478002.1 hypothetical protein VFG1069 Protein 6e-30 60
Spro_1770 YP_001478002.1 hypothetical protein VFG1682 Protein 4e-30 60
Spro_1770 YP_001478002.1 hypothetical protein VFG0663 Protein 2e-31 59
Spro_1770 YP_001478002.1 hypothetical protein VFG0786 Protein 3e-30 59
Spro_1770 YP_001478002.1 hypothetical protein VFG1620 Protein 7e-30 58