Gene Information

Name : Spro_1768 (Spro_1768)
Accession : YP_001478000.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1946401 - 1947234 bp
Length : 834 bp
Strand : -
Note : KEGG: ypi:YpsIP31758_0746 hypothetical protein

DNA sequence : 
ATGCAGACTGAACCTGAAGTATTAACCGACCATACCGATATGATTTGCTCCACCAGCATTGAGCGTATCGTCAACGGACG
GAACGCTGCACTAGTACAAATTGAAGCGCTAATCCACCAGCTTGACGGAATCTCGACGCTGACCCGCAGTATCGGTGGAA
AAAACGCCCTGGACTGGGCCATGAAGCAGGATTTTCGTTGCGGCTGCTGGCTGATGGAGAAAACAGAAACGGCGATGAAA
GTTATTACCCGCAATATCGATCGCGATATATGGCGAGACCTGATGAAGAAGTCCGGAATGCTGTCGCTCATGGACGCTCA
GGCCAGAGACCAGTGGTATAACAGTCTGGAAAAGGATGATATTCCTGCTGTCAGCGAAGCGAACATTCTCAGTACGTTTG
AGCAACTGCATCAGAGCAAGGGTGACGTGTTTGAACGCGGTGTCATTAATATATTCAAAAGCCTATCATGGAATTTTAAG
ACGAACTCGCCTTGTAAGTTTGGCAAGAAAATCATCGTGACCGGGCTGGTGAAATGCGACCGGTGGGGATTTGGGCTTAA
CTGGGGCTGGCAGCGGGATCGGTTAACCGACCTTGAACGCATGCTGATGATCCTTGATGGGCAGCCCATTCCCGACAGCC
GCGCCGACGTTACCCGCCGTCTCGGCGATCATATCCATGAAAACCGGCACAGCACCCATTATGAGGATGAAATGTTTACT
ATTAAATACTTTCAGAAGGGAACGGCACATATCACATTTAAGCGTTCGGAACTGGTTGATAAGCTGAATGACATTATCGC
CAGACACTATCCGGGAGCACTGGCAACGAAATGA

Protein sequence : 
MQTEPEVLTDHTDMICSTSIERIVNGRNAALVQIEALIHQLDGISTLTRSIGGKNALDWAMKQDFRCGCWLMEKTETAMK
VITRNIDRDIWRDLMKKSGMLSLMDAQARDQWYNSLEKDDIPAVSEANILSTFEQLHQSKGDVFERGVINIFKSLSWNFK
TNSPCKFGKKIIVTGLVKCDRWGFGLNWGWQRDRLTDLERMLMILDGQPIPDSRADVTRRLGDHIHENRHSTHYEDEMFT
IKYFQKGTAHITFKRSELVDKLNDIIARHYPGALATK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 6e-94 71
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 6e-93 69
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 5e-93 69
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 5e-93 69
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 5e-93 69
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-92 69
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-92 69
unnamed AAL57572.1 unknown Not tested LEE Protein 7e-93 69
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 1e-92 69
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 1e-91 68
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 6e-92 68
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 2e-92 67
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 3e-92 67
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 3e-92 67
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 3e-84 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1768 YP_001478000.1 hypothetical protein VFG1533 Protein 4e-94 71
Spro_1768 YP_001478000.1 hypothetical protein VFG0666 Protein 1e-92 67
Spro_1768 YP_001478000.1 hypothetical protein VFG1685 Protein 2e-84 63