Gene Information

Name : Spro_1523 (Spro_1523)
Accession : YP_001477755.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Resistance
Product : AraC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 1661567 - 1662025 bp
Length : 459 bp
Strand : -
Note : PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sgl:SG0402 right origin-binding protein

DNA sequence : 
ATGGATCGCGTCAATATCATTCACGATTTGCTGGACTGGATTGAAAATCATCTGGATCAACCCTTGCTGTTAGACAACGT
GGCAGCCAAGTCAGGCTACTCCAAGTGGCACTTGCAAAGGATGTTCCGCAGCACCACCGGCCACGCGCTGGGCAGCTATA
TCCGCGAGCGTCGTCTTTCGCAGGCGGCACAGGCGCTGCGTTCAAGCCCTCGTCCTATTCTCGACATCGCCCTGCAGTTC
CATTTTGATTCCCAACCGTCATTTTCACGCGCGTTCAAAAAACAGTTCGGCAAAACGCCGGCGGTGTATCGCCGCACGAC
TCGCTGGGATGTGGCAGAAATGCGACCGCAGGCTATCGAACCGCTGAACGGACATCGCCATGAGTCGCCGGGCGTGCATC
TGTGGTATGCGGGTAAATCTCTGGACGGGGTCTGCACCAACTGGGTTGGCCAGCACTGA

Protein sequence : 
MDRVNIIHDLLDWIENHLDQPLLLDNVAAKSGYSKWHLQRMFRSTTGHALGSYIRERRLSQAAQALRSSPRPILDIALQF
HFDSQPSFSRAFKKQFGKTPAVYRRTTRWDVAEMRPQAIEPLNGHRHESPGVHLWYAGKSLDGVCTNWVGQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 3e-29 53
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 3e-29 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1523 YP_001477755.1 AraC family transcriptional regulator NC_010558.1.6276025. Protein 1e-29 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1523 YP_001477755.1 AraC family transcriptional regulator VFG1038 Protein 1e-29 53