Gene Information

Name : Spro_1508 (Spro_1508)
Accession : YP_001477740.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1643789 - 1644502 bp
Length : 714 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bur:Bcep18194_C6809 two component transcriptional regulator, winged helix family

DNA sequence : 
GTGGAAAAGCCAAAGAAAATTTTAATCGTCGAGGACGACGGCAACATCGCAGAGCTGCTGCAATTACATCTGCGCGATGA
AGGCTATGACATCAGCCATGCCGCCGATGGCAATCTGGGCATGGCGATGCTGGAACAGGGTGGCTGGGACGCACTGATCC
TCGACCTGATGCTGCCGGGCATTGACGGGCTGGAGATCTGCCGCCGCGCCCGCAATATGACGCGCTACACGCCAATCATT
ATTACCAGCGCGCGCTCCAGCGAAGTGCATCGCGTCCTGGGGCTGGAGCTGGGGGCGGACGACTACCTCGCCAAGCCCTT
CTCAATGCTGGAACTGGTGGCCAGGGTCAAGGCGCTGTTTCGCCGCCAGGAGGCGATGAGCCGCAACCTGCGGATGGACG
CCGGCACGCTCAGTTTTGACGGGTTGACCATCGACCCGATTGCCCGTGAGGTGCATTTGAACCAACAGACCATCGATCTG
ACGCCGCGCGAATTTGACCTGCTGTATTTTTTTGCCAAACACCCCGGCAAGGTGTTTTCCCGCCTCAGCCTGCTCAATCA
GGTGTGGGGTTATCAGCACGAAGGCTACGAGCACACCGTGAATACTCATATCAACCGGCTGCGTATCAAGATCGAAACCA
ATCCGGCGGAACCCGAGCGCATCCTCACCGTGTGGGGCATGGGCTATAAATTCGCGGCGGTGCCGCAAGAGTAA

Protein sequence : 
MEKPKKILIVEDDGNIAELLQLHLRDEGYDISHAADGNLGMAMLEQGGWDALILDLMLPGIDGLEICRRARNMTRYTPII
ITSARSSEVHRVLGLELGADDYLAKPFSMLELVARVKALFRRQEAMSRNLRMDAGTLSFDGLTIDPIAREVHLNQQTIDL
TPREFDLLYFFAKHPGKVFSRLSLLNQVWGYQHEGYEHTVNTHINRLRIKIETNPAEPERILTVWGMGYKFAAVPQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-76 66
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-76 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_012469.1.7685629. Protein 3e-41 45
Spro_1508 YP_001477740.1 two component transcriptional regulator AE000516.2.gene3505. Protein 5e-38 44
Spro_1508 YP_001477740.1 two component transcriptional regulator HE999704.1.gene2815. Protein 8e-43 43
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_010079.5776364.p0 Protein 1e-35 42
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_002952.2859858.p0 Protein 1e-35 42
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_007622.3794948.p0 Protein 1e-35 42
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_003923.1003417.p0 Protein 1e-35 42
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_013450.8614146.p0 Protein 1e-35 42
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_002951.3238224.p0 Protein 1e-35 42
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_007793.3914065.p0 Protein 1e-35 42
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_002758.1121390.p0 Protein 1e-35 42
Spro_1508 YP_001477740.1 two component transcriptional regulator AE015929.1.gene1106. Protein 2e-32 42
Spro_1508 YP_001477740.1 two component transcriptional regulator AF155139.2.orf0.gene Protein 9e-43 42
Spro_1508 YP_001477740.1 two component transcriptional regulator FJ349556.1.orf0.gene Protein 1e-39 42
Spro_1508 YP_001477740.1 two component transcriptional regulator HE999704.1.gene1528. Protein 5e-36 42
Spro_1508 YP_001477740.1 two component transcriptional regulator NC_012469.1.7686381. Protein 1e-42 42
Spro_1508 YP_001477740.1 two component transcriptional regulator AE016830.1.gene1681. Protein 4e-44 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1508 YP_001477740.1 two component transcriptional regulator VFG1563 Protein 1e-76 66
Spro_1508 YP_001477740.1 two component transcriptional regulator VFG1702 Protein 1e-76 66