Gene Information

Name : Spro_1498 (Spro_1498)
Accession : YP_001477730.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1631413 - 1632084 bp
Length : 672 bp
Strand : +
Note : TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pae:PA4885 two-component response regulator

DNA sequence : 
ATGCGGATATTGGTAGTTGAAGACGACATCAGTACGGGTGATTACCTGAAGAAAGGGCTGGGCGAGGCCGGATACAGCGT
CGATTTGGCGCGTAACGGCACCGACGGCCTGTTTCGGGCGCTTGAGGATGCTTACGACGCCATTGTGCTCGACGTGATGC
TGCCAGGGCTGGATGGCTGGCAGATCATTGAGGTACTGCGCAAGAAAAGCGATGTGCCGATCCTGTTTCTGACCGCCCGC
GACGGGGTGCAGGATCGTATTCATGGCCTGGAGCTGGGGGCAGATGATTATTTGATCAAACCTTTTTCCTTCACTGAACT
GGTGTTGCGATTGCGCACCTTATTGCGGCGCGGCACGGTACGTGAGGCCGACCACTATGCCATTGCCGATCTGCAGCTCG
ACGTTCTGCGCCGCAAAGCGGTACGGCAGGAGCAGGTGATCCCGCTGACCAACAAAGAGTTCATGTTGTTGCATCTGTTG
GTGCGTCGTGAAGGGGAAGTGTTGTCACGCACCATGATCGCCTCGCAGGTCTGGGACATGAACTTTGACAGCGATACCAA
TGTGGTGGATGTGGCGATCAAGCGGTTGCGTGCCAAGATTGATCGGCCCTTTGACGTCAAGCTGATCCACAGCGTGCGCG
GTATCGGCTACGTTTGCGAGCCGCGTCCATGA

Protein sequence : 
MRILVVEDDISTGDYLKKGLGEAGYSVDLARNGTDGLFRALEDAYDAIVLDVMLPGLDGWQIIEVLRKKSDVPILFLTAR
DGVQDRIHGLELGADDYLIKPFSFTELVLRLRTLLRRGTVREADHYAIADLQLDVLRRKAVRQEQVIPLTNKEFMLLHLL
VRREGEVLSRTMIASQVWDMNFDSDTNVVDVAIKRLRAKIDRPFDVKLIHSVRGIGYVCEPRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-50 53
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-50 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator BAC0125 Protein 1e-61 63
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator BAC0197 Protein 3e-60 63
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator BAC0308 Protein 9e-56 61
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator BAC0083 Protein 2e-57 61
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator BAC0638 Protein 3e-50 60
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator BAC0111 Protein 3e-54 56
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator BAC0347 Protein 2e-46 52
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator AE000516.2.gene3505. Protein 1e-29 42
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator HE999704.1.gene1528. Protein 1e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator VFG0596 Protein 4e-51 53
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator VFG1390 Protein 2e-34 45
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator VFG1386 Protein 4e-30 43
Spro_1498 YP_001477730.1 two component heavy metal response transcriptional regulator VFG1389 Protein 2e-28 41