|
Name : Spro_1248 (Spro_1248) Accession : YP_001477480.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 1374317 - 1376005 bp Length : 1689 bp Strand : - Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGGCAGCTTCAGCCTTTTTATTGATTGCCAGCTTTATGCTGGTGCTTTTGCTGCTGGCCCGGCCGTTAGGCAGTTTCCT GGCGCGCCTGATCGAAGGTGAACCTTTACCCGCGCTGCGTCGGGTGGAGGCCGCCGTCTGGCGTTGCTGTGGCAATACCA CCGCTGAAATGAACTGGTGGCAGTACGCGCTGGCAATCTTGTGGTTCAACCTGCTCGGCCTGGCGCTGTTGTTTGCGCTG CTGATGACGCAAGGCTCGTTGCCGCTAAACCCGCAGGGTTTCCCTGGCCTGTCATGGGATTTGGCGTTCAATACTGCCGT CAGCTTTGTCACCAACACCAACTGGCAGGCCTACAGCGGTGAAAGCACCCTCAGCTACCTCAGCCAGATGGCCGGGCTGG CAGTGCAGAACTTCCTGTCTGCCGCTACCGGTATCGCCGTGGCCTTTGCGTTGATTCGCGCCTTCACCCGCCGTTCCAGC GCCACCATAGGTAATGCCTGGATCGACGTGTTCCGTATAACGCTGTACGTGTTGCTGCCGATCTCGCTGCTGATCGCGCT GTTCTTCGTCAGCCAGGGCACGCTGCAAAACTTCCTGCCTTACCTGCATATCAGCACGCTGGAAGGCGCGCAGCAGACGC TGCCAATGGGGCCGGTTGCCTCTCAGGAAGCGATCAAGATGCTCGGCACCAACGGCGGCGGCTTCTTCGGCGTCAACTCG GCTCATCCGTTCGAAAACCCGACCGTACTGACCAACTTTGTGCAGATGTTGGCGATCTTCCTGATCCCTTGTGCGCTGTG CTTTTCCTTCGGCCAGGTGGCCGGTGAGAACCGTCAGGGCCATGCGCTGATCTGGGCGATGTCGCTGATCTTCGTGGTGG CCGTCGTAGTGGTGATGTACGCCGAGCTGGCGGGTAACCCGCATCTGAGCGAATTGGGCAGTGCCAGCAACATCAATATG GAAGGCAAGGAATCGCGCTTTGGCATTCTCGCCACCAGCATGTTCTCGGTGGTCACCACCGCAGCGTCCTGTGGGGCCGT CAACGCCATGCATGACTCCTTCACCGCGCTGGGCGGCATGGTGCCCATGTGGCTGATGCAGATTGGTGAAGTGGTGTTCG GCGGCGTCGGTTCCGGCCTGTACGGCATGCTGCTGTTCGTGCTGCTGACGGTGTTTATCGCTGGGTTGATGATTGGGCGT ACCCCGGAATATCTGGGCAAAAAAATCGACGTCTATGACATGAAAATGACCGCGCTGGCGATCCTGGTCACGCCGACCCT GGTGTTGCTGGGCAGCGCACTGGCCATATCTACCGACGTAGGCCGCGCCGGCATTCTTAACCCGGGTGCGCACGGTTTCA GCGAAGTGCTGTATGCCCTGTCCTCCGCCGCCAATAACAACGGCAGCGCCTTTGGTGGGCTGAGCGTCAACACGCCGTTC TACAACCTGCTGTTGGCCTTTGCCATGTTCGTCGGCCGCTTCGGGGTGATCCTGCCGGTGCTGGCAATCGCCGGTTCGCT GTGCGCCAAGAAACGCCAGCCTGCGGGCAACGGGACCTTGCCAACCTACGGGCCGTTGTTTATCGGCCTGCTGGTCGGCA CCGTGCTGCTGGTGGGCGCATTAACCTTCGTGCCTGCGCTGGCGCTGGGACCGGTGGCTGAGCATTTGCAACTTTGGCTG ACCAAATAA Protein sequence : MAASAFLLIASFMLVLLLLARPLGSFLARLIEGEPLPALRRVEAAVWRCCGNTTAEMNWWQYALAILWFNLLGLALLFAL LMTQGSLPLNPQGFPGLSWDLAFNTAVSFVTNTNWQAYSGESTLSYLSQMAGLAVQNFLSAATGIAVAFALIRAFTRRSS ATIGNAWIDVFRITLYVLLPISLLIALFFVSQGTLQNFLPYLHISTLEGAQQTLPMGPVASQEAIKMLGTNGGGFFGVNS AHPFENPTVLTNFVQMLAIFLIPCALCFSFGQVAGENRQGHALIWAMSLIFVVAVVVVMYAELAGNPHLSELGSASNINM EGKESRFGILATSMFSVVTTAASCGAVNAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMLLFVLLTVFIAGLMIGR TPEYLGKKIDVYDMKMTALAILVTPTLVLLGSALAISTDVGRAGILNPGAHGFSEVLYALSSAANNNGSAFGGLSVNTPF YNLLLAFAMFVGRFGVILPVLAIAGSLCAKKRQPAGNGTLPTYGPLFIGLLVGTVLLVGALTFVPALALGPVAEHLQLWL TK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 7e-78 | 50 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 5e-78 | 50 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-61 | 48 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-61 | 48 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-61 | 48 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 6e-61 | 48 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 9e-62 | 48 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 4e-61 | 48 |
