Gene Information

Name : Spro_1158 (Spro_1158)
Accession : YP_001477390.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1273740 - 1274426 bp
Length : 687 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypp:YPDSF_2717 ABC transporter ATP-binding protein

DNA sequence :
ATGCCAGCGGAAAACGTTCTTGAAGTTCATCATCTTAGTAAACACGTTGGTCAGGGTGAGCATCAGCTCTCCATCCTTAC
CGGAGTCGAGCTGGTTGTCAAACCCGCGCAGACAATTGCCCTGATTGGCGAGTCCGGCTCGGGCAAGTCAACGCTGCTGG
GGATCCTCGCCGGGCTGGACGACGGCAGTGAAGGGGAGGTGCATTTGTTGGGCGAGTCACTGACCGCGCTGGATGAAGAG
GGTCGCGCCGCGCTTCGCGCCAAAAATGTCGGGTTTGTGTTTCAATCCTTTATGTTGGTACCGACGCTCAATGCGCTGGA
AAACGTCCAGTTACCGGCGTTGCTGCGTGGGGAAAGCGATCGCCAGAGCCGCGAACAGGCGGTGCAGCTGCTGGAACAGC
TTGGGCTGGGCAAGCGCCTTGACCACTTGCCGGCGCAGCTTTCCGGCGGCGAACAACAACGCGTAGCATTGGCGCGGGCG
TTCAGTGGCCGACCGCGGGTGCTGTTTGCCGATGAACCCACCGGTAACCTCGATCGCCAGACCGGTGAACGCATCGCCGA
TCTACTGTTTTCCCTCAACCGCGATTTCGCCACTACGTTAATCCTGGTCACCCATGACGAAACCCTGGCGGCTCGCTGCC
AGCGTCGGCTGCGCCTGCGTGAAGGCCAGCTGTGGGAGGAAGCATGA

Protein sequence :
MPAENVLEVHHLSKHVGQGEHQLSILTGVELVVKPAQTIALIGESGSGKSTLLGILAGLDDGSEGEVHLLGESLTALDEE
GRAALRAKNVGFVFQSFMLVPTLNALENVQLPALLRGESDRQSREQAVQLLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FSGRPRVLFADEPTGNLDRQTGERIADLLFSLNRDFATTLILVTHDETLAARCQRRLRLREGQLWEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-31 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1158 YP_001477390.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 1e-30 46
Spro_1158 YP_001477390.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 4e-36 44
Spro_1158 YP_001477390.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 2e-33 41