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Name : Spro_1053 (Spro_1053) Accession : YP_001477285.1 Strain : Serratia proteamaculans 568 Genome accession: NC_009832 Putative virulence/resistance : Virulence Product : fimbrial biogenesis outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1158265 - 1160778 bp Length : 2514 bp Strand : - Note : PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: kpn:KPN_00277 putative fimbrial usher DNA sequence : ATGCAGCAACAACGCACTACAGGAATAAAACCGCTGAGGATGATGATACTGACCGCACTGGCGTTGTCGCCGGCGGTACA GGCGCGGGACTATTTCAACCCGGCCCTGCTGGAGCAGGGCGACGCCCGCCAAAGCCAGACCGACCTGTCGGTGTTTGAAG ACGCCGGCGGACAGCCCCCCGGCACCTATCGGGTGGATATCCTGCTCAACGAACGCCTGACCGAGACCCGGATGGTCACC TTCAGCGCCGCCCCCGACGGCCTGCAACCCTGCCTGAGCGTGGCCGACCTGGCCGACTGGGGGGTGCGAACCGCCCTGTT CCCGGCGCTTGGCAGCGCAGACAGCCGCTGCGCCAATCTGGCCGCCATTCCCCAGGCGTCGGCGCAGCTGCGTTTCAGTC AGCAGCAGCTGGTGCTGAGCATTCCCCAGGCGGCCATGACGCCGCAACCGCGCGGTTATGTGCCCTCGTCACAATGGGAC GAGGGTATCCCGGCGCTGATACTCAATTACAGCCTGACCGGCGCAGACACCACCGCCCGCGGCAGCGGTCGGGGTAGCGA CAGCAACAGCCAGTTCGCCAACCTGCGTCCCGGCCTGAACGCCGGCCCCTGGCGCTTGCGCAACTACACCACCTGGCGCC GCAGCAGCGACGGCAAGGATAAATGGGACACGGTCTACACCTACGCGCAGCGCAACCTGATTGGCCTGCAAAGCCAGTTG ACCCTGGGCGACAGCAATGCCCCGGCCGAGGTGTTTGACGCCGTGCCCTTTCGCGGCGTGCAGCTGGCCTCGGATGACGA GATGCTGCCCGACAGCCTCCGCGGTTACGCCCCGGTGGTGCGTGGCATCGCCCGCACCAATGCCCAGGTGGTGGTGCGCC AGAACGGCTATGAAATCTACCGCACCTTTGTGGCCCCCGGCGCCTTCGTGATTAACGACATGTACCCCACCGGCGGCAGC GGTGACCTGCAGGTCACCATCAAGGAAGCGGACGGCAGCGAACAACAGTTGGTGGTGCCCTTCGCCTCGCTGCCGGTGCT GCAGCGGGAAGGCCGACTCAAATACAGCCTGACCGGCGGCCAGTACCGCAGCTATGACCGCAGCGTGGATAAAAGCGCCC TGGTGCAGGGCACCGCGATTTACGGCCTGCCGTGGAACACCACGCTGTACGGCGGCGTGCAGGCGGCGCAACACTACCAG TCGGCGGCGCTGGGGCTGGGCAACAACCTCGGTGAGTGGGGCGCGTTCTCCGTGGACATGACGCAGTCGCGCAGCCAGCC GAAAGACCAGGACAGCGCCACCGGCCAGTCATGGCGGGTACGCTACAGCAAGAATCTGGTGCAGACCGGCACCAACTTCG CCATCGCCGGTTACCGCTACTCCACCGCGGGGTTCTACTCGCTGGCAGAAGTACTGGACGGCTGGCGCAGCAGCAGCACG CCGTTCTGGCAGAACGAACGGCGGCGCAACCGGGCCGAACTGAGCATGAACCAGCAGCTGGGGCCGCAGGCGGGCAGCCT GTCGCTGAGCGCGGTGCGGGAAGACTACTGGAACAGCGAACGCAGCCTCGCGTCACTGGGGCTGGGCTACAGCAACAGCT GGCGCGGCATCAGTTACGGCGTCAACTGGAGCTACAACCGTAACACCCAGGGTGCCACCCGCAGCAACGACCAGCAGATA GCGCTGAACCTCAACGTGCCGCTGAACCTGTGGGACAACAACAACGCCTGGGTCAACTACGGCCTTAACAGCACCAAGGG CGGCGCGACCAGCCACAACCTGGGGCTGAGCGGCGTGGCACTCCGTGACAACAGCCTGAGCTGGGGCGTGCAGCAGACCT ACGGCAGCCGGGGCCAGGGCTACGGCGGCAACAGCAATCTGGACTACCGCGGCACCTACGGCGAAGTGACTGCCGGTTAC GGCTATGACAAAGACAGCCGGCGCCTGAACTACGGGCTGCAGGGCAGCGTGGTGGCGCACCAGAACGGCATCACGCTGGG CCAGCCGCTGGGGGAAACCGCCGCGCTGGTAGCGGCCCCGGGCGCGCCGGGGGTGAGCGTGAGCAACCAGACCGGGGTGC GTACCGACTACCGCGGCTACGCGCTGGTGCCCTACCTGACGCCGTACCGCAACGGCAATGTGGCGCTGAACCCGGAAACG CTGCCGACGGACGCGGAGATTGAACAGAACAGCCAGCGGGTCACCCCAACGCGGGGCGCGCTGGTCCGCGCCACCTTTAC AGCCAAAGTGGGTGCACGAGTGCTGATGACCTTAACCCAGGCCGATGGCCGCCCGGTACCCTTTGGTGCCACGGTCAGCG AGACCGACCAAAATGCGGCCCAGGGCAGCATCGTCGGCGACAGCGGCCAGGTGTACCTGAGTGGCCTGGCCGACAGCGGC AGCCTGCGGGTGAAATGGGGCAACGGCAGCGGCGGAGAATGCCGGGTTAATTATCGGCTGCCAACAGGAGCCCCTGTTGG GGGCATCATGCAGATAGAGGGAATCTGTCGATGA Protein sequence : MQQQRTTGIKPLRMMILTALALSPAVQARDYFNPALLEQGDARQSQTDLSVFEDAGGQPPGTYRVDILLNERLTETRMVT FSAAPDGLQPCLSVADLADWGVRTALFPALGSADSRCANLAAIPQASAQLRFSQQQLVLSIPQAAMTPQPRGYVPSSQWD EGIPALILNYSLTGADTTARGSGRGSDSNSQFANLRPGLNAGPWRLRNYTTWRRSSDGKDKWDTVYTYAQRNLIGLQSQL TLGDSNAPAEVFDAVPFRGVQLASDDEMLPDSLRGYAPVVRGIARTNAQVVVRQNGYEIYRTFVAPGAFVINDMYPTGGS GDLQVTIKEADGSEQQLVVPFASLPVLQREGRLKYSLTGGQYRSYDRSVDKSALVQGTAIYGLPWNTTLYGGVQAAQHYQ SAALGLGNNLGEWGAFSVDMTQSRSQPKDQDSATGQSWRVRYSKNLVQTGTNFAIAGYRYSTAGFYSLAEVLDGWRSSST PFWQNERRRNRAELSMNQQLGPQAGSLSLSAVREDYWNSERSLASLGLGYSNSWRGISYGVNWSYNRNTQGATRSNDQQI ALNLNVPLNLWDNNNAWVNYGLNSTKGGATSHNLGLSGVALRDNSLSWGVQQTYGSRGQGYGGNSNLDYRGTYGEVTAGY GYDKDSRRLNYGLQGSVVAHQNGITLGQPLGETAALVAAPGAPGVSVSNQTGVRTDYRGYALVPYLTPYRNGNVALNPET LPTDAEIEQNSQRVTPTRGALVRATFTAKVGARVLMTLTQADGRPVPFGATVSETDQNAAQGSIVGDSGQVYLSGLADSG SLRVKWGNGSGGECRVNYRLPTGAPVGGIMQIEGICR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 1e-155 | 43 |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 3e-145 | 43 |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 1e-148 | 42 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 4e-150 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Spro_1053 | YP_001477285.1 | fimbrial biogenesis outer membrane usher protein | VFG0454 | Protein | 9e-172 | 45 |
| Spro_1053 | YP_001477285.1 | fimbrial biogenesis outer membrane usher protein | VFG0944 | Protein | 2e-157 | 44 |
| Spro_1053 | YP_001477285.1 | fimbrial biogenesis outer membrane usher protein | VFG0876 | Protein | 2e-155 | 43 |
| Spro_1053 | YP_001477285.1 | fimbrial biogenesis outer membrane usher protein | VFG0446 | Protein | 4e-147 | 42 |
| Spro_1053 | YP_001477285.1 | fimbrial biogenesis outer membrane usher protein | VFG0853 | Protein | 4e-153 | 42 |
| Spro_1053 | YP_001477285.1 | fimbrial biogenesis outer membrane usher protein | VFG0857 | Protein | 2e-143 | 41 |
