Gene Information

Name : Spro_1041 (Spro_1041)
Accession : YP_001477273.1
Strain : Serratia proteamaculans 568
Genome accession: NC_009832
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1144656 - 1145345 bp
Length : 690 bp
Strand : +
Note : TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: ypi:YpsIP31758_3136 phosphate regulon transcriptional regulatory protein PhoB

DNA sequence : 
ATGGCAAGACGCATACTGGTGGTGGAAGACGAAGCGCCGATCCGTGAGATGGTGTGCTTTGTGTTGGAACAGAATGGTTA
CCAACCGTTGGAAGCTGAGGATTATGACAGCGCAGTGACGCGCCTGTCTGAGCCGTTCCCTGATTTAGTGTTGCTCGACT
GGATGTTACCCGGAGGTTCCGGCATTCAGTTTATTAAACATATGAAGCGTGAAGCGATGACCCGCGATATTCCGGTGATG
ATGCTGACCGCACGCGGTGAAGAAGAAGACCGTGTCCGTGGGCTGGAGGTCGGGGCGGATGATTACATCACCAAACCCTT
CTCGCCGAAGGAGCTGGTGGCGCGCATCAAGGCGGTAATGCGCCGCATTTCACCGATGGCGGTGGAAGAAGTGATTGAAA
TGCAAGGGCTGAGCCTGGATCCTTCTTCACACCGGGTGATGGCCAACGAGCAGGCGCTGGATATGGGGCCGACCGAGTTC
AAATTGCTGCACTTCTTTATGACTCATCCAGAGCGTGTTTATAGCCGCGAACAGTTGCTTAATCACGTCTGGGGCACTAA
CGTTTATGTGGAAGACCGCACCGTTGACGTGCATATCCGTCGGCTCCGTAAGGCGTTAGAGACCAGTGGTCATGACAAAA
TGGTTCAAACCGTTCGGGGCACCGGCTACCGATTCTCAACGCGCTACTGA

Protein sequence : 
MARRILVVEDEAPIREMVCFVLEQNGYQPLEAEDYDSAVTRLSEPFPDLVLLDWMLPGGSGIQFIKHMKREAMTRDIPVM
MLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPSSHRVMANEQALDMGPTEF
KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALETSGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-34 41
CDB402_0209 YP_005126722.1 two-component system response regulator Not tested Not named Protein 2e-32 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1041 YP_001477273.1 two component transcriptional regulator HE999704.1.gene2815. Protein 2e-39 43
Spro_1041 YP_001477273.1 two component transcriptional regulator BAC0596 Protein 6e-34 41
Spro_1041 YP_001477273.1 two component transcriptional regulator CP001138.1.gene2239. Protein 6e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Spro_1041 YP_001477273.1 two component transcriptional regulator VFG1563 Protein 1e-34 41
Spro_1041 YP_001477273.1 two component transcriptional regulator VFG1702 Protein 8e-35 41