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Name : Ssed_0874 (Ssed_0874) Accession : YP_001472613.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 1039848 - 1041839 bp Length : 1992 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGTCATCTCGCAAAGAACTCGCAAACGCTATCCGCGCATTAACTATGGATGCCGTTCAGAAAGCCAAATCTGGTCACCC AGGTGCACCAATGGGGATGGCGGATATTGCTGAAGTGCTATGGAATGATTTCCTTAAGCACAACCCAAACAACCCTGAAT GGGTTGATCGCGACCGTTTCATTCTATCAAACGGCCACGGCTCAATGCTTATCTACTCTTTGCTTCACCTTACGGGTTAT GCATTGCCAATCGAAGAGCTGCAAAACTTCCGTCAACTTCACTCTAAAACGCCTGGTCACCCGGAATATGGTTACACACC GGGTGTTGAAACGACGACAGGTCCATTAGGCGCCGGTATCAGTAACGCTGTAGGTATGGCTATTGCTGAGAAGACATTGG CTGCTCAGTTTAACCGCCCGGGTCACGACATCGTCGATCACTTCACCTATTGCTTCCTTGGCGATGGCTGTTTGATGGAA GGTATCTCCCACGAAGCCTGTTCACTGGCCGGCACTTTAGGTCTGGGTAAGCTGGTCGCATTTTGGGATGACAACGGTAT CTCTATCGACGGACACGTCGAAGGTTGGTTCACCGATGACACGCCTAAGCGTTTCGAATCATATGGCTGGCATGTGATTG CTAACGTCGATGGCCACGATAGTGATGCTATCCGCGCGGCGATCGAAGAAGCTAAATCTGTTACCGATAAGCCAACAATG ATCTGCTGTAAGACAACAATTGGTTTTGGTTCACCAAACAAGTCTGGTAGCCACGATTGTCACGGCGCACCATTAGGCGA TGCTGAAATCCAAGCGACTCGTGAGTTCCTTGGCTGGGAGCATGGCGCATTTGAAATCCCTGAAAATGTTTATACGGGTT GGGATGCAAAAGATATTGGCGCGACCAGAGAGTCTGCGTGGAATGAAAAGCTAGCCTCATATAAGGCTGAATTCCCTGAA TTGGCCAGTGAATATGAACGTCGTGTTATTACCGGCGAGCTCCCTGCTGATTTCGAAACGAAGGCACAAGCTTTCATTCA AGAGTGTCAGGATAAAGCGGAAGGCATTGCCAGCCGCAAAGCATCACAAAATGCTATCGCAACATTCGGAGCTATCTTAC CTGAAATGTTAGGCGGATCGGCTGACCTGGCAGGGTCTAACCTGACACTTTGGTCTGGTTCTAAAGGTATTCAAGATGAC GCCGCGGGTAACTACATCTATTACGGTGTACGTGAATTCGGTATGAGCGGCATCATGAATGGTGTATCACTGCACGGTGG TTTCATCAACTTCGGTGCGACCTTCATGATGTTTATGGAATACGCTCGTAACGCGGTACGTATGTCTGCGCTGATGGGCA TTCAAAACATCTTCGTCTATACCCATGATTCAATTGGTCAGGGGGAAGATGGTCCTACTCATCAGCCTGTAGAACAATTG GCTAACCTGCGTATGACTCCGAATATGACTGTGTGGCGTCCATGTGATGCTGCTGAAACGGCTGTATCATGGAAGAACGC TATTGAACGTCGCGAGGCGCCAACATCATTGATCTTCAGCCGTCAAGGCCTGAAGGCTCAACCACGTAGCGCTCAGCAGT TAGCGGATGTGGCGAAAGGTGGCTATGTCTTAGTCGATTGCGCCGGTACTCCGGATCTGATCCTTATCGCTACAGGCTCT GAAGTACAGTTAGCTATCGATTCAGCTGCAGTGCTTACAGAACAGGGTCAGAAGGTACGTGTAGTGTCTATGCCGTCAAC TAACGAGTTTGATAAGCAAGATGCGGCATATAAAGAGTCAGTACTGCCAAGCACTGTGACTAAGCGTGTTGCTATCGAAG CGGCTCACGTCGATTTCTGGCATAAGTACGTTGGATTCGGTGGCGCTGTGGTTGGTATGACTACGTTCGGTGAGTCGGCT CCGGGTGGAGAGTTGATGAAGCACTTTGGCTTTACTGTCGAGAATGTAGTTGAAACGGCTAAAGGACTCTAA Protein sequence : MSSRKELANAIRALTMDAVQKAKSGHPGAPMGMADIAEVLWNDFLKHNPNNPEWVDRDRFILSNGHGSMLIYSLLHLTGY ALPIEELQNFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAEKTLAAQFNRPGHDIVDHFTYCFLGDGCLME GISHEACSLAGTLGLGKLVAFWDDNGISIDGHVEGWFTDDTPKRFESYGWHVIANVDGHDSDAIRAAIEEAKSVTDKPTM ICCKTTIGFGSPNKSGSHDCHGAPLGDAEIQATREFLGWEHGAFEIPENVYTGWDAKDIGATRESAWNEKLASYKAEFPE LASEYERRVITGELPADFETKAQAFIQECQDKAEGIASRKASQNAIATFGAILPEMLGGSADLAGSNLTLWSGSKGIQDD AAGNYIYYGVREFGMSGIMNGVSLHGGFINFGATFMMFMEYARNAVRMSALMGIQNIFVYTHDSIGQGEDGPTHQPVEQL ANLRMTPNMTVWRPCDAAETAVSWKNAIERREAPTSLIFSRQGLKAQPRSAQQLADVAKGGYVLVDCAGTPDLILIATGS EVQLAIDSAAVLTEQGQKVRVVSMPSTNEFDKQDAAYKESVLPSTVTKRVAIEAAHVDFWHKYVGFGGAVVGMTTFGESA PGGELMKHFGFTVENVVETAKGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 71 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 64 |
