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Name : Ssed_0731 (Ssed_0731) Accession : YP_001472470.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 874646 - 875623 bp Length : 978 bp Strand : - Note : KEGG: slo:Shew_3306 KpsF/GutQ family protein DNA sequence : ATGGTAGATGAAACTCAATTACGCCAATGGGGCAGAAATGTTATCGATATCGAAAGAAATGCTCTCGATAATCTATACCA ATATGTAGATTCTGCAGAGTTTGCCACGGCGTGTCGGTTAATCCTCGAATGTACCGGTAAGGTCATCGTCATGGGGATGG GCAAATCCGGACATATAGGTAATAAGATTTCGGCAACCTTAGCCAGTACTGGCACCCCCGCATTCTTCGTGCACCCCGGT GAAGCCAGCCATGGCGATCTTGGCGTTCTGAGTGAAAATGATATCATCTTAGCTATCTCCAACTCAGGTGAAGCCAGTGA AATTCTCACCTTGATGCCGGTGATCAAGCGAATGGGACTTCCAATCATCGCCGTTACGGGTAAGCCCGAATCGAATATGG CAAAGCTGTCTATCGTACACCTGTGTATCGAAGTACCGGAAGAGGCTTGTCCTCTGGGGCTTGCGCCGACCTCCAGCACG ACTGCCACATTAGTTATGGGGGATGCTCTAGCCGTCGCACTGCTACAGGCCAGAGGGTTTACCAAGGATGATTTTGCCTT GTCACACCCAGGCGGTAGCTTAGGCCGAAAATTACTGCTAAAAGTCAGCGATGTTATGCATAAAGCTTCCGAGCTCCCTC TGGTCAGCCATAATATCTGTATCACAGATGCGCTATATGAGATCTCAAAGAAAGGGCTGGGAATGACAGCCGTCGTCGAT GATGATAATAAACTCGTCGGTATCTTTACCGATGGCGATCTGCGCAGGGTTATCGACGCAGAAGTCAATCTGAGAAAGAC CTCGATAAGTGATGCCATGAGCAGAGGCTGCGTGACAGTTTCCGATGATATTTTGGCAGCCGAAGCATTGAAAGTGATGG AAGAGAAAGACATTAACGGCCTGATTGTCATCGATGAACAGCAACAGCCAATCGGTGCATTGAACATGCTGGATATGGTA AAAGCGGGAGTGATCTAG Protein sequence : MVDETQLRQWGRNVIDIERNALDNLYQYVDSAEFATACRLILECTGKVIVMGMGKSGHIGNKISATLASTGTPAFFVHPG EASHGDLGVLSENDIILAISNSGEASEILTLMPVIKRMGLPIIAVTGKPESNMAKLSIVHLCIEVPEEACPLGLAPTSST TATLVMGDALAVALLQARGFTKDDFALSHPGGSLGRKLLLKVSDVMHKASELPLVSHNICITDALYEISKKGLGMTAVVD DDNKLVGIFTDGDLRRVIDAEVNLRKTSISDAMSRGCVTVSDDILAAEALKVMEEKDINGLIVIDEQQQPIGALNMLDMV KAGVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 1e-55 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 6e-56 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-55 | 43 |
