Gene Information

Name : Ssed_0713 (Ssed_0713)
Accession : YP_001472452.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Virulence
Product : glycosyl transferase family protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 859613 - 860644 bp
Length : 1032 bp
Strand : +
Note : KEGG: ppr:PBPRB0750 hypothetical glycosyl transferase

DNA sequence :
ATGGCACAGCCAACGTCAACAAATCGCGGTGATGGTCAGATTTGTCTCTCTATTCTTATTCCTATGTACAACGAGGCTGA
AATGCTTCAGCCACTCTTTTCCCGTTTAAGCCAAGTGTTATCGAGTATCCCCGAGTCCTCTGAGATCGTATTTATAGATG
ATGGGAGTAGCGATAAGACCTGGGATCTACTGCAGCAGTTACCCGTCTCATCCAGTGAACATCAGTGTATTCGTCTGAGT
CGAAATTTTGGTAAAGAGGCGGCGATGACCGCAGGATTAGAGCAGGCAAGGGGGTTGGCGGTTATCCTGCTCGATGCCGA
CCTTCAGGACCCTCCGGAGTTGATCCCTCAGATGTTGCAGGCTTGGAGGGAGGGCTTCGATGTTGTCAATATGAAGCGCA
GGAAACGCTTGGGGGAATCCTGGTTTAAGCGTCTGTCTGCTGCCGCCTTTTATCGGGTGATCAATAGTATGGCTGAGTCG
CCCGTGCCGGAGAATGTCGGAGATTTTAGGCTAATCAGCCGTCAGGTAGTAGACAGTATCAACGAATTACCCGAAAGAAA
TCGATTCATGAAAGGGATCCTGAGCTGGCCGGGGTTCTCTCAGACCGAGATTCTGTTCGATCGTGATCCCCGCCATCTCG
GAGAGACTAAATGGAATTACAGTAAGCTTATCGGTTTAGCTATGGATGGCATTACCTCATTTAGTATCAAGCCATTGAGG
TTGGCGACTTGGGCCGGTCTACTCACCGCTTTATCTGCATTTACCTACGGTGGTTGGGTATTTTTGAAGACGGTATTGTG
GGGCGGTGAGGTGGCTGGTTATCCATCACTGATGATAGTGCAGGTGGCTCTGGCCGGGGTTCAACTATTGGCGCTTGGTT
TGATTGGTGAGTATTTAGGTCGAGTATTTATGGAAGTAAAACAGAGGCCTATATATCTGATCCGTGAGGTTGAGCAGCAA
CAGAGTACACGTACCAGTGTGAGTCATGCTGAGGTGGGTGAGAATGTTCGCTATCTGGAGTCGACGCGATGA

Protein sequence :
MAQPTSTNRGDGQICLSILIPMYNEAEMLQPLFSRLSQVLSSIPESSEIVFIDDGSSDKTWDLLQQLPVSSSEHQCIRLS
RNFGKEAAMTAGLEQARGLAVILLDADLQDPPELIPQMLQAWREGFDVVNMKRRKRLGESWFKRLSAAAFYRVINSMAES
PVPENVGDFRLISRQVVDSINELPERNRFMKGILSWPGFSQTEILFDRDPRHLGETKWNYSKLIGLAMDGITSFSIKPLR
LATWAGLLTALSAFTYGGWVFLKTVLWGGEVAGYPSLMIVQVALAGVQLLALGLIGEYLGRVFMEVKQRPIYLIREVEQQ
QSTRTSVSHAEVGENVRYLESTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-51 46
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 2e-50 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ssed_0713 YP_001472452.1 glycosyl transferase family protein VFG0670 Protein 1e-51 45