|
Name : Ssed_0644 (Ssed_0644) Accession : YP_001472384.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : transposase InsF for insertion sequence IS3A/B/C/D/E/fA Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 783434 - 784201 bp Length : 768 bp Strand : - Note : KEGG: pca:Pcar_1347 transposase InsF for insertion sequence IS3A/B/C/D/E/fA DNA sequence : TTGAGTAACCGAGAAGCTGAAGATAAAAGATTGCTAGGTAAGATTAAGCAATTTTGGCTGGAGAGTGGCTGTGTGTATGG TTATCGAAATATTACATTGGACCTCAAGGATGACGGTGAATCGGTTGGTAAAAATCGTGTGCATCGCATTATGAAAGCTG CTCAGATTAAGGCTGTACGAGGCTATAAGCGTAATCCAAGCTTTGGTGGTGGCGATGTTAGCCATACAGCACCAAACACG CTAAATCGTGGCTTTGATGTCGCTAAGCCTAACAAAGTTTGGGTGACCGATTTTACTTATATCCGCACCCATGAAGGTTG GTTGTATCTAACTGTTGTGATCGACCTATTCTCACGACAAGTTGTCGGTTGGACGATGAAAAGCACACCTAAGGCGGACT TGGTTATTGACGCGCTATTGATGGCGATATGGCGACGTTCTCCGACCGAAAAGGTACTGATACATTCCGATCAAGGTGTG CAATATACCTGTTCAGACTGGCGTAGTTTTCTTAAAGAACACAACCTTGAAGCAAGTATGAGCCGCAGAGGAAACTGTCA TGATAACGCTGTTGCAGAGAGCTTTTTCTCACTCCTAAAGAAGGATAGAGTTAAGCGAAAAGTCTACAAAACCAGAGACG AAGCACGCTCTGAAATATTTAACTATATAGAATATTTCTATAATCCAGTTCGACATCATGGTAGTAATAACGGACTGTCT CCGATGAAGTTCGAAAAGCAGTATTTTGAGAAACTAGAAAGTGTCTAG Protein sequence : MSNREAEDKRLLGKIKQFWLESGCVYGYRNITLDLKDDGESVGKNRVHRIMKAAQIKAVRGYKRNPSFGGGDVSHTAPNT LNRGFDVAKPNKVWVTDFTYIRTHEGWLYLTVVIDLFSRQVVGWTMKSTPKADLVIDALLMAIWRRSPTEKVLIHSDQGV QYTCSDWRSFLKEHNLEASMSRRGNCHDNAVAESFFSLLKKDRVKRKVYKTRDEARSEIFNYIEYFYNPVRHHGSNNGLS PMKFEKQYFEKLESV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 2e-31 | 44 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 2e-31 | 44 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 5e-39 | 42 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 8e-40 | 41 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 4e-35 | 41 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 1e-35 | 41 |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 5e-36 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ssed_0644 | YP_001472384.1 | transposase InsF for insertion sequence IS3A/B/C/D/E/fA | VFG1484 | Protein | 1e-31 | 44 |
