Gene Information

Name : Ssed_0574 (Ssed_0574)
Accession : YP_001472314.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Resistance
Product : ArsR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 700340 - 700684 bp
Length : 345 bp
Strand : +
Note : KEGG: slo:Shew_0417 transcriptional regulator, ArsR family

DNA sequence :
ATGACCGCATTAGATCTATTTAAAGCCCTGAGTGATGAAACCCGTTTGCGCAGCCTGCTCCTGATCCAGGCTGAGCAGGA
GCTCTGCGTCTGTGAGTTAATGCAGGCGCTGGAAGAGAGTCAGCCAAAAGTGTCCAGGCACTTGGCTCAACTAAGAAAGT
TTGGCCTGCTTACCGACAGGCGTCAGGGACAATGGGTCTTCTATCGATTGAATCCTTCGCTGCCCAAGTGGGCGAATGCC
GTGATAGATGAAACCTGCTCGGCCAATCGAGCCTTGATCCAGGATGAGCTGACCCGCTTGAACAAGATGGGTGACAGACC
CGATCGTGTTAAGAGTTGCTGCTAG

Protein sequence :
MTALDLFKALSDETRLRSLLLIQAEQELCVCELMQALEESQPKVSRHLAQLRKFGLLTDRRQGQWVFYRLNPSLPKWANA
VIDETCSANRALIQDELTRLNKMGDRPDRVKSCC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsR2 YP_001007630.1 DNA-binding transcriptional repressor ArsR Not tested YAPI Protein 9e-22 57
arsR CAJ77018.1 arsenite inducible repressor Not tested AbaR1 Protein 2e-20 55
arsR AFC76435.1 ArsR Not tested AbaR5 Protein 3e-20 55

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ssed_0574 YP_001472314.1 ArsR family transcriptional regulator BAC0591 Protein 2e-21 60
Ssed_0574 YP_001472314.1 ArsR family transcriptional regulator BAC0589 Protein 8e-22 58
Ssed_0574 YP_001472314.1 ArsR family transcriptional regulator BAC0588 Protein 2e-18 51
Ssed_0574 YP_001472314.1 ArsR family transcriptional regulator BAC0594 Protein 7e-21 47