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Name : hslU (Ssed_0530) Accession : YP_001472270.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 647610 - 648935 bp Length : 1326 bp Strand : - Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTGAAATGACCCCACGTGAGATAGTCCATGAGTTAGACACTCACATTATTGGCCAACATGATGCGAAACGTTCGGT GGCTATCGCCCTGCGTAACCGCTGGCGTCGTATGCAACTCGATGTCGATTTCCGTCAGGAAGTGACCCCAAAGAATATCT TAATGATAGGTCCTACCGGCGTCGGTAAAACAGAGATCGCCCGCCGCCTGGCTAAACTGGCAAAGGCGCCGTTTATCAAG GTCGAAGCCACTAAGTTCACCGAAGTGGGCTATGTCGGCAAAGAAGTGGAACAGATCATTCGCGATCTTACCGATTCTGC GATTAAGATGACCCGTGAAGATCAGATGAAGAAGTGCAAATTCAAAGCCGAAGAGGCCGCTGAAGAACGCATTCTCGATG CACTTCTACCTAAGCCTAAAGAGGATTGGGACAACGAAAAGCCCGATGATTCGGCGACTCGCCAGATCTTCCGTAAGAAG CTTCGTGAAGGTCAACTTGACGACAAAGAGATCGAAATTGACGTTGCTGCACCTCAGGTCGGCATCGAAATCATGTCTCC TCCAGGCATGGAAGAGATGACAAACCAGCTACAAAGCATGTTCCAGAATATGGGGCCCGGCGACAGCAAGCGTCGTAAGA TGCCAATCAAAGAAGCTTACAAGCTTATGATTGAAGAGGAAGCTGCAAAACTCGTCAATCAAGATGACATGAAAGAGCAG GCTATCGAACTGGTTGAGCAGCACGGTATCGTCTTCTTAGATGAGATCGATAAGATCTGTAAGCGTGGTGAATCTTCAGG TCCGGATGTATCCCGTGAAGGTGTACAGCGTGACCTGCTGCCTTTAGTTGAAGGTTGCACGGTCAACACCAAACACGGCA TGGTTAAAACCGACCATATCCTGTTTATCGCCTCAGGTGCATTCCAGATGTCTAAGCCGTCAGACTTGATCCCGGAACTA CAGGGTCGTCTGCCCATTCGTGTCGAGCTCAGCGCCCTGACTGCCGATGACTTCAAGCGCATCTTAACCGAGCCTCATGC CTCACTCACTGAGCAACACGTTGCTATGATGGGCACCGAAGATGTGAAAATTGAGTTCACCGAAGATGGCATCGAGAGCA TCGCTCAAGCTGCATGGCAGGTAAACGAGCGTACCGAAAATATCGGTGCCCGTCGTCTGCACACAGTGATGGAGCGTCTG ATGGAAGATCTATCCTATGACGCGTCTGACAAGTCCGGTAACACCTTCGTTATCGATGCTGAATATGTCAGCAGCCACTT AGATGATTTAGTGCAAGACGAAGATCTAAGCCGCTTTATTCTATAA Protein sequence : MSEMTPREIVHELDTHIIGQHDAKRSVAIALRNRWRRMQLDVDFRQEVTPKNILMIGPTGVGKTEIARRLAKLAKAPFIK VEATKFTEVGYVGKEVEQIIRDLTDSAIKMTREDQMKKCKFKAEEAAEERILDALLPKPKEDWDNEKPDDSATRQIFRKK LREGQLDDKEIEIDVAAPQVGIEIMSPPGMEEMTNQLQSMFQNMGPGDSKRRKMPIKEAYKLMIEEEAAKLVNQDDMKEQ AIELVEQHGIVFLDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVNTKHGMVKTDHILFIASGAFQMSKPSDLIPEL QGRLPIRVELSALTADDFKRILTEPHASLTEQHVAMMGTEDVKIEFTEDGIESIAQAAWQVNERTENIGARRLHTVMERL MEDLSYDASDKSGNTFVIDAEYVSSHLDDLVQDEDLSRFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 4e-93 | 47 |
