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Name : Ssed_0433 (Ssed_0433) Accession : YP_001472174.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : - Position : 528266 - 529693 bp Length : 1428 bp Strand : + Note : E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGAGTAACGAAATCAAAACTCAGGTATTGGTAGTAGGTGCAGGTCCTGCTGGTTATTCAGCGGCATTTCGTGCGGCTGA TTTAGGTCTGGAAGTCATCATCGTTGAGCGTTTCAACACGCTTGGTGGTGTATGTTTGAATGTAGGCTGTATCCCATCAA AAGCGCTGCTTCACGTATCTAAAGTGATCGAAGAGGCGAAAGCGGTTGCGAGCCACGGTGTTGTTTTTGGTGAGCCGCAA ATTGATCTTGATAAGCTTCGTAGCTTTAAAGAAACGGTGATTAGTCAGCTAACCACAGGTTTGGGCGGAATGTCCAAGAT GCGTAAGGTTGATGTTGTTAATGGTTTTGGTAAGTTTACCAGCCCTAATACCATTGAAGTTACGGGTGAAGATGGCGTTA AAGTTATTCGCTTCGAACAAGCCATTATTGCCGCGGGTTCACGTCCTATTCAATTGCCATTTATCCCACATGAAGACCCA CGTATCTGGGATTCGACCGATGCGCTAGAGCTTAAAGAAGTACCTGGAAAGCTACTTGTTATGGGTGGTGGTATTATCGG CCTCGAGATGGGGACAGTATACTCGTCACTGGGTAGTGAGATTGACGTGGTTGAGATGTTTGACCAGGTTATTCCTGCCG CTGACAAAGATATCGTTCGTGTTTACACTAAGAAGATTAAGAAGAAATTTAATCTTATCTTACAGACTAAAGTTACCGCC GTTGAAGCTAAAGAAGATGGTATCTATGTGTCTATGGAAGGTAAGAAAGCGCCTGCGGAACCTGTACGTTACGATGCCGT GCTTGTGGCAATTGGCCGTACGCCAAATGGCAAGCTGATTGATGCAGAAAAAGCGGGCGTTAATATCGATGAGCGTGGTT TCATCAATGTCGATAAGCAGATGCGCACTAACGTGCCAAACATCTATGCTATCGGCGATATCGTTGGCCAGCCAATGCTT GCGCATAAAGGTGTACATGAAGGTCACGTTGCCGCAGAAGTTATCTCTGGTCTTAAGCATTTCTTCGATCCTAAGGTTAT CCCATCAATTGCCTATACCGACCCTGAGGTCGCGTGGGTAGGTTTAACTGAGAAAGAAGCGAAAGAGCAAGGCGTTGCTT ATGAAACGGCTACTTTCCCATGGGCCGCAAGTGGGCGTGCTATCGCATCAGACTGTAGCGATGGTATGACTAAGCTTATC TTCGATAAAGAGACACACCGTGTGATCGGTGGTGCTATCGTAGGCGTTAACGGTGGTGAGCTATTGGGTGAAATCGGCCT TGCTATCGAGATGGGTTGTGATGCTGAAGACTTAGCGTTGACTATTCACGCTCACCCAACCCTACATGAATCAGTTGGTT TGGCCGCTGAAATCTATGAAGGTTCTATAACTGATTTGCCTAATCCAAAAGCAAAAAAGAAAAAGTAA Protein sequence : MSNEIKTQVLVVGAGPAGYSAAFRAADLGLEVIIVERFNTLGGVCLNVGCIPSKALLHVSKVIEEAKAVASHGVVFGEPQ IDLDKLRSFKETVISQLTTGLGGMSKMRKVDVVNGFGKFTSPNTIEVTGEDGVKVIRFEQAIIAAGSRPIQLPFIPHEDP RIWDSTDALELKEVPGKLLVMGGGIIGLEMGTVYSSLGSEIDVVEMFDQVIPAADKDIVRVYTKKIKKKFNLILQTKVTA VEAKEDGIYVSMEGKKAPAEPVRYDAVLVAIGRTPNGKLIDAEKAGVNIDERGFINVDKQMRTNVPNIYAIGDIVGQPML AHKGVHEGHVAAEVISGLKHFFDPKVIPSIAYTDPEVAWVGLTEKEAKEQGVAYETATFPWAASGRAIASDCSDGMTKLI FDKETHRVIGGAIVGVNGGELLGEIGLAIEMGCDAEDLALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 2e-65 | 41 |
