Gene Information

Name : Ssed_4355 (Ssed_4355)
Accession : YP_001476085.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 5330581 - 5331015 bp
Length : 435 bp
Strand : -
Note : KEGG: slo:Shew_3616 general secretion pathway protein G

DNA sequence : 
ATGCAAGCAAGAAACAAACAGAAAGGTTTTACCTTACTCGAAGTGATGGTTGTTATCGTGATCTTAGGTATCTTAGCCTC
TATGGTTGTGCCTAACTTGATGGGTAATAAAGATAAGGCCGATCTGCAGAAAGCCGTTTCGGATATCGTTGCGTTAGAAA
ATTCTTTGGATATGTATAAGCTGGATAACAGCATCTACCCAACGACAGAGCAGGGGTTAGAAGCATTAGTTCAGAAGCCT
ACTATCTCTCCGGAGCCACGTAATTACCGTGCCGATGGTTATGTGAAGCGTTTACCACAGGATCCATGGAGAAATAATTA
CCTGCTACTTAGCCCGGGTGAGAATGGCAAGCTAGATGTGTTCAGCGCCGGCCCCGATGGTCAGCCAGGTACCGAAGATG
ATATCGGTAACTGGAACCTGCAAGATTACCAGTAA

Protein sequence : 
MQARNKQKGFTLLEVMVVIVILGILASMVVPNLMGNKDKADLQKAVSDIVALENSLDMYKLDNSIYPTTEQGLEALVQKP
TISPEPRNYRADGYVKRLPQDPWRNNYLLLSPGENGKLDVFSAGPDGQPGTEDDIGNWNLQDYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-44 67
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 4e-44 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Ssed_4355 YP_001476085.1 general secretion pathway protein G VFG2050 Protein 1e-44 67
Ssed_4355 YP_001476085.1 general secretion pathway protein G VFG1871 Protein 1e-33 56
Ssed_4355 YP_001476085.1 general secretion pathway protein G VFG0180 Protein 6e-34 56