Gene Information

Name : Ssed_0427 (Ssed_0427)
Accession : YP_001472168.1
Strain : Shewanella sediminis HAW-EB3
Genome accession: NC_009831
Putative virulence/resistance : Unknown
Product : nicotinate-nucleotide diphosphorylase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0157
EC number : -
Position : 519719 - 520624 bp
Length : 906 bp
Strand : -
Note : KEGG: shw:Sputw3181_0522 nicotinate-nucleotide pyrophosphorylase

DNA sequence :
ATGTTGGAAAATGACATTCGGTTATCAGTCAAAACCGCACTCGAAGAAGACTTAGGTTATCAAGATAATGCAGCTGTCTC
AGGACGAGATAAGGCCAACTCAGACATTACAGCCCAACTGATACCGGCCGATAGATACGCTCAGGCGACATTGATTACCC
GCGAAGAGGGCGTATTTTGCGGTAAAGCCTGGGCAGAGCAGGTATTCAATCAACTGGGTGGTGAGGTCGCGCTTCATTGG
CATGTTGACGATGGTGACCTCCTTGTACCGAATCAACTATTGTGTGAACTCTCGGGACCAGCAAGAGCCATACTCACAGG
CGAGCGCACTGCGATGAATTTCATCCAGACGCTTTCTGGCGTTGCGACTCACACCAAGCATTACATAGATAAAATTGCCG
ACACTCACACTAAACTGCTCGATACACGTAAAACCATTCCCGGCCTTCGCACGGCACAAAAATATGCCGTTACCTGTGGA
GGCGGTAAGAATCATCGTATAGGGCTGTTTGACGCTTTTCTCATTAAAGAAAACCACATTATGGCCTGTGGCAGTATTTC
AAAAGCTATCTCAGCAGCCAGAGCCCTGCATCCCGATAAGCCGGTAGAAGTTGAAGTAGAGAGCATTCAAGAGCTTCAAC
AGGCACTGGAAGCCAGATCTGACATCGTCATGTTAGATAACTTCGATGTCACCATGATGCTGGAAGCTGTCGAGCTAAAT
AATCAGTTTTTTGATCAATTAAATGCAGATAAGACGGCGAGTAAAACCAAGCTGGAAGTCTCCGGCGACGTGACACTGGA
TACCATTGCCAACTACGCTAAAACAGGTGTCGATTACATCTCTGTTGGAGCCTTGACCAAACACGTTAGGGCGCTCGATC
TATCACTTAGGCTAAAAAACACCTAG

Protein sequence :
MLENDIRLSVKTALEEDLGYQDNAAVSGRDKANSDITAQLIPADRYAQATLITREEGVFCGKAWAEQVFNQLGGEVALHW
HVDDGDLLVPNQLLCELSGPARAILTGERTAMNFIQTLSGVATHTKHYIDKIADTHTKLLDTRKTIPGLRTAQKYAVTCG
GGKNHRIGLFDAFLIKENHIMACGSISKAISAARALHPDKPVEVEVESIQELQQALEARSDIVMLDNFDVTMMLEAVELN
NQFFDQLNADKTASKTKLEVSGDVTLDTIANYAKTGVDYISVGALTKHVRALDLSLRLKNT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nadC YP_281534.1 nicotinate-nucleotide pyrophosphorylase Not tested Not named Protein 4e-36 41