|
Name : Ssed_4272 (Ssed_4272) Accession : YP_001476004.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : argininosuccinate lyase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0165 EC number : - Position : 5243279 - 5244652 bp Length : 1374 bp Strand : - Note : catalyzes the formation of arginine from (N-L-arginino)succinate DNA sequence : ATGGCATTATGGGGTGGAAGATTTAGCCAGGAGAGTAGCGCGCTATTTAAATTATTCAATGACTCATTGCCTGTCGATTA CCGCTTGGTCGAGCAAGATATTGTCGGCTCGATAGCTTGGGCCGGTGCTATCACCCAGGTGGGGATTTTGTCTGAAGCTG AGTGTCAGCAACTACAACAGGCATTAAAAGAGCTATTGGGTGAAGTGGAAGAGAAGCCTGAGCTTATTCTGGCGTCGGGT GCCGAAGACATTCACAGTTTTGTCGAACTATCTTTGATTGCTAAAGTCGGGGATCTTGGAAAAAAACTTCATACTGGGCG TTCACGCAATGATCAAGTAGCAACCGATCTTAAGCTTTGGTGTAAGAAAGAGGGTCAGCAGCAACTGTTGTTGCTTAAAG CGTTAAGGCAAGCGCTATTAGAGCTGGCAGAAAGAGAACTTGACGCTGTTATGCCAGGTTACACACATCTTCAGCGTGCA CAACCAGTGGCTTTCGGGCATTGGTGCTTAGCCTATGTTGAGATGTTTGAGCGTGATATTAGTCGTTTAGAAGATGCGCT CAAACGTGCCGATACTTGTCCTCTGGGAACGGGGGCACTTGCAGGTACTGCATATCCTATGGATAGGTATAAGCTGGCGG AATCCTTGGGTTTCGCGTCGCCGACACTCAATAGTTTAGATACTGTGTCGGACAGGGACCATGTAGTTGAGATCTGCAGT GATGCTTCAATTAGCATGATGCACCTAAGCCGTATGGCGGAAGATCTTATCTTCTTTAACAGCGGTGAAGCCGGTTTCAT CGACCTCGATGATGAAGTTACATCCGGATCTTCACTAATGCCACAGAAGAAGAATCCTGATGCACTCGAGTTAATCCGTG GTAAAACGGGCCGGGTTTATGGCAGCCTTATCGGTATATTAACGACCATGAAGGCACTGCCGTTAGCCTACAACAAAGAT ATGCAGGAAGACAAAGAGGGCTTATTTGATGTGATGGATAGCTGGGCTATCTGTCTCGAAATGGCTGCTTTAGTGCTAAG TGGTTTAAAGGTTAATCGTGAAAACACCTTAAGTGCTGCGCAGCAGGGCTATGCAAATTCTACCGAACTTGCAGACTACC TTGTAGCTAAAGGTATGCCATTTAGAGAGGCACATCATGTCGTCGGTGAAGTCGTGGTTAAAGCGATAGCGCAGAAGAAA CCCTTAGAGGATTTTGAGCTGAAAGACCTGCAATCATTTTCAGAAATTATCACAAGTGATGTGTATGATTGTCTGACAAT TGAATCATGTCTTGAGAAACGAGAAGCGCTAGGCGGAACAGCTTTACCCCAGGTCAGAGCCGCATTGGCAACAAAATTAG CCGCTTCTGAGTAG Protein sequence : MALWGGRFSQESSALFKLFNDSLPVDYRLVEQDIVGSIAWAGAITQVGILSEAECQQLQQALKELLGEVEEKPELILASG AEDIHSFVELSLIAKVGDLGKKLHTGRSRNDQVATDLKLWCKKEGQQQLLLLKALRQALLELAERELDAVMPGYTHLQRA QPVAFGHWCLAYVEMFERDISRLEDALKRADTCPLGTGALAGTAYPMDRYKLAESLGFASPTLNSLDTVSDRDHVVEICS DASISMMHLSRMAEDLIFFNSGEAGFIDLDDEVTSGSSLMPQKKNPDALELIRGKTGRVYGSLIGILTTMKALPLAYNKD MQEDKEGLFDVMDSWAICLEMAALVLSGLKVNRENTLSAAQQGYANSTELADYLVAKGMPFREAHHVVGEVVVKAIAQKK PLEDFELKDLQSFSEIITSDVYDCLTIESCLEKREALGGTALPQVRAALATKLAASE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00324 | YP_008207789.1 | Argininosuccinate lyase | Not tested | AbaR25 | Protein | 2e-85 | 48 |
| BJAB0868_00328 | YP_008211654.1 | Argininosuccinate lyase | Not tested | AbaR26 | Protein | 2e-85 | 48 |
