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Name : hemC (Ssed_4133) Accession : YP_001475865.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0181 EC number : - Position : 5052227 - 5053156 bp Length : 930 bp Strand : + Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis DNA sequence : ATGTCTCAAAACGTCATTCGAATCGCAACACGTAAAAGCCCACTTGCACTTTGGCAAGCAGAATTTGTGAAAGCTGAACT GGAAAAATTCCACGAAGGTTTGACGGTAGAACTTCTACCTATGAGTACTAAAGGCGACATCATCCTTGACACACCACTGG CAAAAGTAGGTGGTAAAGGGCTATTTGTTAAAGAGCTGGAGGTTGCCATGCTTGAAGACAGAGCCGATATTGCTGTGCAT TCGATGAAAGATGTTCCAGTCGACTTTCCAGAAGGTTTAGGCTTAGAAGTTATTTGTGAGCGTGAAGACCCACGCGATGC TTTTGTATCTAATAACTACAAGAATATCAGCGAACTACCTCAAGGTGCAGTCGTTGGTACATCGAGCCTACGACGTCAAT GCCAGATCAGAGCGTCACGCCCCGATCTTGTGATCAGAGATCTGCGCGGCAACGTAGGTACCCGTTTAGGAAAACTAGAT GCGGGCAATTATGACGCCATTATTCTTGCGGCTGCAGGCCTTAAGCGCCTGAAGCTTGAGGAGCGCATTACCAGCTTTAT CTCTGCAGAAGAATCCCTACCGGCCAATGGCCAGGGTGCAGTAGGTATTGAGTGTCGCATCAATGACGAAAGAGTAAAGG CGCTTCTTGCCCCACTCGAGCACACTGAAACACGTCACCGTGTTATCGCCGAGCGCGCAATGAACACTCATCTGGAAGGC GGATGTCAGGTTCCTATCGGAGCCTATGCCGAGATCCAAGATGATACACTGACGCTACGTGGTTTAGTCGGTAATCCCGA TGGTAGCCACATCATCGAAGCGACAAAGGTTGGTTCTAAGACTGATGCACAAGCAATTGGTGTTGCACTGGCTGAAGAGT TGCTCAGCAAAGGCGCTAAAGCCATTCTCGATGCCGTTTATATCAAATAG Protein sequence : MSQNVIRIATRKSPLALWQAEFVKAELEKFHEGLTVELLPMSTKGDIILDTPLAKVGGKGLFVKELEVAMLEDRADIAVH SMKDVPVDFPEGLGLEVICEREDPRDAFVSNNYKNISELPQGAVVGTSSLRRQCQIRASRPDLVIRDLRGNVGTRLGKLD AGNYDAIILAAAGLKRLKLEERITSFISAEESLPANGQGAVGIECRINDERVKALLAPLEHTETRHRVIAERAMNTHLEG GCQVPIGAYAEIQDDTLTLRGLVGNPDGSHIIEATKVGSKTDAQAIGVALAEELLSKGAKAILDAVYIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 2e-82 | 61 |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 2e-82 | 61 |
