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Name : murD (Ssed_0408) Accession : YP_001472149.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : - Position : 476911 - 478242 bp Length : 1332 bp Strand : + Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation DNA sequence : ATGGTTAACCACAAGTCGCACCTGATATTGGGATTGGGAGCCACAGGCCTCTCGGTTGTGCGTTATCTACATGGCCTGGG GATCACTCCCTTGGTTATGGATAGTCGTCAGCAACCTCCTGGTGCGGATAAGTTGGCGGCAGAGTTTCCCGATGTCGAGT TGATCAGTGGCGGCTTCGACTGTCGATATCTGGTGCAGGCGACTCAGATCATTGTCAGTCCGGGCATCGCTATCGATACA CCGGAAATCCGAGCCGCGATAGATATGGATATTGAGGTTATCGGCGATGTCGAGCTATTTGCCAGAGCGGTCAAAGAGCG GGATGCTTGCGTTATCGGTATCACTGGATCGAATGGAAAATCTACAGTAACGACCTTAGTGGCTGAGATGGCTAAGGCTG CGGGTATCAATTATGCCGTTGGTGGCAATATTGGTATTCCTGTTTTAGATCTACTCCAGAGCGATATTGAGCTGTATGTA TTGGAGCTGTCGAGTTTTCAATTAGAAACAACTCACAGCTTGAATTGTATTTCGGCTACTTGCCTTAATATCAGTGAAGA TCATATGGATAGATATAGTGATATCGAAGCATATCGTCAGGCTAAGTTGAGGTTATATTCACAAACCCGGTTCGCTCTGT TTAATCGAGAAGATGAGCTGACTAAACCCAAAGATCCGATGAACCAGAACAGTTTTGGTTTATCTCTGCCCGACAATGAT GAGTGGGGAGTCTGCGAGGGCAAGATAGTACACGGTAGTGTAGAGGTTATCAGTCTTCAGGATGTTGCTCTGGTCGGCAG CCATAATCATGCCAATTTGATTGCCGCTATGGCGCTTGCTTATCAAGCCGGTATAGAAAAGGCTGCAATGGTTGAGGTCG CTTCATCGTTTACCGGGCTCGAGCATAGGTTTGAGATGGTCGTTAACCGAAACGGTGTTGCTTACATTAACGACTCTAAG GCGACAAATGTCGGTGCTACTGTGGCGGCTATCGAGGGGATCAGTGAACACCTGGGTGATATCATTTTAATTGCCGGTGG TGATGGAAAAGGAGCGGATTTCAAACCTTTGGTGCCAGTGTTAAAGGCGGTGAGCCATCTCATTACATTAGGTAAAGATG GAGATAAGATCGCCGCCCTGTCCGACAGCTCGATTAGGGTTGATTCTATGGCTGATGCGGTCAATAAAGCCGCACAGTTA GCCATAGCTGGTGATATTGTTTTGTTGTCTCCGGCGTGTGCCAGTTTGGATATGTACAAGAATTTTATGGAAAGAGGCGA TGATTTTCGCCGGTTAGCCGAAGGGTTAAGCGCCGAGGCATTAAATGCGTAG Protein sequence : MVNHKSHLILGLGATGLSVVRYLHGLGITPLVMDSRQQPPGADKLAAEFPDVELISGGFDCRYLVQATQIIVSPGIAIDT PEIRAAIDMDIEVIGDVELFARAVKERDACVIGITGSNGKSTVTTLVAEMAKAAGINYAVGGNIGIPVLDLLQSDIELYV LELSSFQLETTHSLNCISATCLNISEDHMDRYSDIEAYRQAKLRLYSQTRFALFNREDELTKPKDPMNQNSFGLSLPDND EWGVCEGKIVHGSVEVISLQDVALVGSHNHANLIAAMALAYQAGIEKAAMVEVASSFTGLEHRFEMVVNRNGVAYINDSK ATNVGATVAAIEGISEHLGDIILIAGGDGKGADFKPLVPVLKAVSHLITLGKDGDKIAALSDSSIRVDSMADAVNKAAQL AIAGDIVLLSPACASLDMYKNFMERGDDFRRLAEGLSAEALNA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 6e-60 | 43 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 6e-60 | 43 |
