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Name : Ssed_3993 (Ssed_3993) Accession : YP_001475725.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Resistance Product : AcrB/AcrD/AcrF family metabolite exporter Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 4886670 - 4889747 bp Length : 3078 bp Strand : + Note : KEGG: pha:PSHAb0438 metabolite exporter, AcrB/D/F family DNA sequence : ATGGATACCAATACCGAAAAACAAGGCAGCGGCATTGCCGGTTTTTTTATTAAAAATGCCGTCATTAGTTGGCTGATAAT GGTGTTACTTGGCGTCGGCGGCTACTTTGCGTTTCAAGACTTAGGCCGTCTCGAAGACCCGGAGTTTACACCGCGCTCAG CCATGATTGTCACCAGCTATCCAGGTGCGTCTGCGCAGCAGGTCGAGGAGGAGCTATCACTTCCTATCGAAAACGCACTG CAACAACTGCCCTATGTTAAATACATAAAGTCGGTTAATACGGCGGGATTAAGCCAAGTCGAAGTGATGATGGAGTCGCA GTATACCGGCAAGTATCTGCCACAGATCTGGGATGAAGTTAGGCGCAAAATTGGCGACTTAAAGGGGCTTCCCCCCGGCG CGGATAAGCCAACGGTTAACGATGATTTTGGTGACGTATATGGCATGATTTGGGGCATATCTGGTGAAGGGTACAGTTAT GCCGAATTAGAGTCATATGCTGACTATCTTCGTCGTGAGGTGGTGACGATAGAGGGGGTGAGCAAAGTCAGTGTTGCAGG TACACAGCAACAACAAGTGTTTATCGAGCTTTCAAGGCGAAAGCTAGCGGCGCTTGATATCCCGGTTAGCCATATAGAGT CACTTTTAGCTCTGCAAAATGTGGTTTCAAACGCCGGCAGAATTCGAGTGCAAAATGACACCATTCGTCTGTCGCCAACG GGGGAGTTCTCTAGTGTCAGTGAGCTGAAAAATCTTGTAGTTAGCCCCAAGGGCAGTGATGCGCGAATTTATCTGAATGA TGTTGCTGACATTAGCACTGGTTACGCCAAAACCCCCATAAAAATCATGACCATTAACGGTCAGCCTGCACTTGAATTTG GGGTGTCATTTCTTCGCGGCCAGAACGTCATCGCGGTAGGCGAGCGGATCAACACCTTAATCGATTCGCTTGAAAAGGTT CGGCCCATCGGCATGGAGCTGGAGCTTATCTACAATCAGCCAGAACAGGTTGAACAAGCGGTCGATGGATTTGTCATCAG CCTTATTCAAGCCGTTGCCATCGTTATTTTTGTGCTTTTGCTGACCATGGGGCTCAGAAGTGGCTTCATTATTGGTACCG TTTTAATACTTAGTGTTATGGGTACCTTTATGGCCATGGAGCAAATGGCTATTGATTTGCAAAGGATTTCACTAGGCGCA CTGATCATTGCTCTAGGAATGCTGGTGGATAACGCTATCGTAGTTGTTGAAGGCATACTCATCGGCATGCAACGTGGTAA ATCTCGCTTCGATGCGGCTGTGGAGATTGTAAAGCAAACCCAATGGCCACTGTTAGGGGCAACCGTTATTGCGGTAACCG CATTTGCCCCGATTGGCTTATCTGAAGATATTTCGGGTGAGCTCGTTGGTAGTCTGTTTTGGGTGGTCCTGTTTTCATTG ACGCTTAGCTGGATCACCGCTATTACCATCACCCCATTCTTGGCCGACCGACTGTTTAAAAACGTTAAGGTTGCTAAAGA TGGTGAGTTTATCGATCCCTATAAAGGTGTCATTTTCACAAGTTACCGAGTCTTGCTGCAAGGCTGTATTCGCTACCGCA AAACCACCATGTTACTGCTCATTGTACTATTGCTGGGTTCAGTGAAAGGCTTTGGCATGCTGAAAAATGAGTTCTTTCCA CCAATGAACTTACCCAAGTTTATGGTCGATACATGGCTGCCATATAACTCCGATATTAATGCCACCGCTGAGCATATGAG AAAGGTGGAGGAGGCGGTACTCGCACACCCTGAAGTAGAGCAAGTTTCCTCTAGCATAGGTGGAGGTCATGTTCGGTTCA TGCTCGCCTATAAGCCTGAGAAGCTTTACAACAACTATGGCAATTTGCTCATCACAGTCAAAGATATCGATCGCCTCAAA GAGGTGATGAGCGATGTCGAAGAGATTGTCGAGCAAGGCTTTGCCGGTGCGACATATAACTTCAAGCGCTTCGAGATGGG ACCTGCACCAGATGGCCGAGTTGAGGCAAGGTTTGTTGGTCCGGATCCTGATGTATTAAGGAGCTTATCTGCGCAGGCCA AAGCAATTATGGAGCGTTCTCAAGATGCGTCGGCCATCAGAGATGACTGGCGCGAGCGTACCAAAGTGATCCGGCCTCAA TTCAATGATGCTGCGGGTCGGTCACTCGGGATCAGCAAGGCGCAAGTGGATGGCGTGTTACTGGCAAACTTCTCGGGCAG AACCGTAGGACTCTATCGAGATGGTAGTGATTTGCTGCCCATCATTATTCAACCTCCAGAGCAGGAGCGACTAGATATTG GCGGGATTAGTGAACTGCAGATTTGGAGTCATGAGTTAAGCCAGTACGTCAATCTTGGCCAAGTGCTGAAAGAAGTACTG GTGGAGTTTGAAGATCCCGTCATTATGCGACGAGACCGCAAACGCACTATTATGGCGATGACTGATGAAAGTCCAATGGG CAGTAGTACCACGGCGTCAGTTTTAAACTCATTTAAAGCTGAAGTTGAAGCCATTGAGCTGCCCGAAGGCTACAACTTAA CTTGGGGTGGAAAGTATGAGTCATCTCGCGATGCCATGATTGCCTTGAGTGAAAAACTTGGCGGCGGCTATTTGGTCATG GTGCTGATAACCATCTTTTTGTTTGCCTCCTATAAAGATGCTGCTGTTATCTGGACTGTAGTGCCATTCGCTCTTATTGG GGTTGTCGTAGGTCTCTACTTTGCCAATATGCCTTTCACCTTCTTGGCATTGCTGGGAACCATGAGCCTATCGGGCATGC TGATTAAAAATGCCATTGTGCTGGTTGAAGAGATAAAGCTGCAGCTCTCCCAAGGTAAAGAGGCCTACCTTGCTGTTGTG GATGCGTCAGTGTCTAGGGTTCGTCCGGTAAGTATGGCAGCGGTTACGACCGTACTTGGCATGATCCCATTGATTTTTGA CGGCTTTTTCCAGGCTATGGCTGTTGCCATTATGTCGGGCCTCACCTTCGCCACGATATTAACCCTCATCGTGATCCCTG TGATGTACACCATGATCCATAAAATCAAAGCGCAGTAG Protein sequence : MDTNTEKQGSGIAGFFIKNAVISWLIMVLLGVGGYFAFQDLGRLEDPEFTPRSAMIVTSYPGASAQQVEEELSLPIENAL QQLPYVKYIKSVNTAGLSQVEVMMESQYTGKYLPQIWDEVRRKIGDLKGLPPGADKPTVNDDFGDVYGMIWGISGEGYSY AELESYADYLRREVVTIEGVSKVSVAGTQQQQVFIELSRRKLAALDIPVSHIESLLALQNVVSNAGRIRVQNDTIRLSPT GEFSSVSELKNLVVSPKGSDARIYLNDVADISTGYAKTPIKIMTINGQPALEFGVSFLRGQNVIAVGERINTLIDSLEKV RPIGMELELIYNQPEQVEQAVDGFVISLIQAVAIVIFVLLLTMGLRSGFIIGTVLILSVMGTFMAMEQMAIDLQRISLGA LIIALGMLVDNAIVVVEGILIGMQRGKSRFDAAVEIVKQTQWPLLGATVIAVTAFAPIGLSEDISGELVGSLFWVVLFSL TLSWITAITITPFLADRLFKNVKVAKDGEFIDPYKGVIFTSYRVLLQGCIRYRKTTMLLLIVLLLGSVKGFGMLKNEFFP PMNLPKFMVDTWLPYNSDINATAEHMRKVEEAVLAHPEVEQVSSSIGGGHVRFMLAYKPEKLYNNYGNLLITVKDIDRLK EVMSDVEEIVEQGFAGATYNFKRFEMGPAPDGRVEARFVGPDPDVLRSLSAQAKAIMERSQDASAIRDDWRERTKVIRPQ FNDAAGRSLGISKAQVDGVLLANFSGRTVGLYRDGSDLLPIIIQPPEQERLDIGGISELQIWSHELSQYVNLGQVLKEVL VEFEDPVIMRRDRKRTIMAMTDESPMGSSTTASVLNSFKAEVEAIELPEGYNLTWGGKYESSRDAMIALSEKLGGGYLVM VLITIFLFASYKDAAVIWTVVPFALIGVVVGLYFANMPFTFLALLGTMSLSGMLIKNAIVLVEEIKLQLSQGKEAYLAVV DASVSRVRPVSMAAVTTVLGMIPLIFDGFFQAMAVAIMSGLTFATILTLIVIPVMYTMIHKIKAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Ssed_3993 | YP_001475725.1 | AcrB/AcrD/AcrF family metabolite exporter | BAC0428 | Protein | 0.0 | 53 |
| Ssed_3993 | YP_001475725.1 | AcrB/AcrD/AcrF family metabolite exporter | BAC0519 | Protein | 0.0 | 52 |
| Ssed_3993 | YP_001475725.1 | AcrB/AcrD/AcrF family metabolite exporter | BAC0526 | Protein | 0.0 | 50 |
| Ssed_3993 | YP_001475725.1 | AcrB/AcrD/AcrF family metabolite exporter | BAC0425 | Protein | 0.0 | 41 |
