|
Name : Ssed_3940 (Ssed_3940) Accession : YP_001475672.1 Strain : Shewanella sediminis HAW-EB3 Genome accession: NC_009831 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 4812899 - 4814380 bp Length : 1482 bp Strand : - Note : KEGG: sbl:Sbal_0894 catalase DNA sequence : ATGAATAAGCAAAATATGACAGAGCAAACCAACTACCTGACCAGCCAAAATGGCGCGCCGGTTGCTGATGATCAAAACTC ATTGACGGCGGGAGAGCGTGGACCTGTACTGCTGCAAGATTTTCATCTGTTAGAAAAACTCGCTCACTTCAATCGCGAAC GAATTCCGGAGCGAGTGGTCCATGCGAAAGGTACAGGGGTATATGGCACTTTTACCGTGACAAAAGATTTGAGTGCGTAC ACGATTGCGGATCACTTTAATGAAGTGGGCAAACAGACTGAGACCTTCGTGCGTTTCTCTACCGTAGGCGGTGAGATGGG ATCGGCCGATGCCGAGCGAGATCCCCGGGGCTTCGGTCTGCGTTTTTACACCGCTCGTGGTAATCACGACATAGTCGGAA ATAACACGCCAACCTTTTTCCTGCGTGACGGGATTAAGTTTCCGGACTTTATCCATACCCAAAAGCGTAACCCTCAGACA AACCTGAAAGATCCGCAAGCAATGTGGGACTTCTGGGCATTGAACCCCGAGGCTTTACATCAGGTCACTGTGCTGATGTC TGATCGCGGGATCCCGGCTAACTATCGTCAGATGAATGGCTATGGTTCGCACACCTACTCGCTCTGGAATGCGAAGGGTG AACGCTTCTGGGTTAAATTCCACTTTAAGACCAAGCAGGGAATCGCTAACTTGACCCCTGAGCAGGCCGATATTTTAAAG GGTATCGATCCCGACTCATCACAGCGAGACATGGTCGCGGCGATAAACGATGGCAACTTCCCACGTTGGTCGGTGAAAGT ACAGATCATGCCTGAGGCTGATGCGAATACCTATTCTATTAACCCATTCGACTTGACCAAGGTATGGCCACATGGGGATT ACCCGCTGATCGAAATTGGAGAGCTGGAACTCAACCGTATGCCGGAAAATTACTTTGCCGAAGTCGAGCAGGTAGCATTA GCACCAAGCAATCTGGTTCCGGGGGTTGGCGCCTCACCGGATAAGATGTTGCAAGCCCGATTATTCGCATATGCCGATGC TCAGCGCTACCGTATCGGGGCTAACTATAACCAGCTACCGGTAAATTGCCCTCATGGGACTAAGGCAAACCATCATCAAA GAGCCGGAGCGATGGCTGGCACTCAGTGTCCTTATCATGGCAGTCAGACCGGCGGTGATGCTTCTGCAAACTATGGTCCG AACAGCCGCATTGAAGGCTTGAGCGACACCTCTCAGTTTATCGAGCCACCTTTGCGTCTCGATGGCGAGGCCGACAGATA CAGTCGTTATAACCAAGATGATTTTACTCAGGCGGGTAACCTGTATCGCATTCTTTCCGAAGAGGAAAAAGCGCGCTTGA TCAACAATATCTGCGGAACCCTGAGTCAGACCACACTCGATGTGCAGCAGACCATGGTCGAACACTTCACTAAAGCCGAT GCCGACTACGGTCAGCGCATCAAACAGGCTTTAGGTTTGTAA Protein sequence : MNKQNMTEQTNYLTSQNGAPVADDQNSLTAGERGPVLLQDFHLLEKLAHFNRERIPERVVHAKGTGVYGTFTVTKDLSAY TIADHFNEVGKQTETFVRFSTVGGEMGSADAERDPRGFGLRFYTARGNHDIVGNNTPTFFLRDGIKFPDFIHTQKRNPQT NLKDPQAMWDFWALNPEALHQVTVLMSDRGIPANYRQMNGYGSHTYSLWNAKGERFWVKFHFKTKQGIANLTPEQADILK GIDPDSSQRDMVAAINDGNFPRWSVKVQIMPEADANTYSINPFDLTKVWPHGDYPLIEIGELELNRMPENYFAEVEQVAL APSNLVPGVGASPDKMLQARLFAYADAQRYRIGANYNQLPVNCPHGTKANHHQRAGAMAGTQCPYHGSQTGGDASANYGP NSRIEGLSDTSQFIEPPLRLDGEADRYSRYNQDDFTQAGNLYRILSEEEKARLINNICGTLSQTTLDVQQTMVEHFTKAD ADYGQRIKQALGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-124 | 54 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 4e-103 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 4e-103 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 4e-103 | 47 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 1e-104 | 47 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 4e-103 | 47 |
